Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
CtcfQ61164 Gm25699-201ENSMUST00000082896 167 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Gm23460-201ENSMUST00000083258 109 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CtcfQ61164 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CtcfQ61164 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CtcfQ61164 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.31□□□□□ -1.72
CtcfQ61164 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CtcfQ61164 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CtcfQ61164 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CtcfQ61164 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC4.3□□□□□ -1.72
CtcfQ61164 Gm14142-201ENSMUST00000117833 296 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Gm13478-201ENSMUST00000118312 413 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Gm15364-201ENSMUST00000119618 585 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Gm14605-201ENSMUST00000120599 268 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.3□□□□□ -1.72
CtcfQ61164 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CtcfQ61164 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Gm18396-201ENSMUST00000177095 361 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Gm27718-201ENSMUST00000183721 86 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.3□□□□□ -1.72
CtcfQ61164 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Gm19032-201ENSMUST00000208584 592 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CtcfQ61164 Gm18729-201ENSMUST00000217230 621 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Gm7540-201ENSMUST00000219764 926 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.3□□□□□ -1.72
CtcfQ61164 AC144628.1-201ENSMUST00000227943 466 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CtcfQ61164 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
CtcfQ61164 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CtcfQ61164 Gm22287-201ENSMUST00000083197 107 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CtcfQ61164 Gm38090-201ENSMUST00000195733 1942 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CtcfQ61164 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.3□□□□□ -1.72
CtcfQ61164 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CtcfQ61164 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.3□□□□□ -1.72
CtcfQ61164 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CtcfQ61164 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CtcfQ61164 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CtcfQ61164 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CtcfQ61164 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CtcfQ61164 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CtcfQ61164 Gm22091-201ENSMUST00000116908 127 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm14677-201ENSMUST00000117866 486 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm15994-201ENSMUST00000118029 402 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm14845-201ENSMUST00000121259 306 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm15157-201ENSMUST00000121852 702 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm23906-201ENSMUST00000157573 128 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm23023-201ENSMUST00000158767 109 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.29□□□□□ -1.72
CtcfQ61164 Gm3851-201ENSMUST00000168653 318 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CtcfQ61164 Gm26652-202ENSMUST00000181672 475 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm28552-201ENSMUST00000190725 388 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm29038-201ENSMUST00000191543 678 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm37670-201ENSMUST00000193622 229 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm5552-201ENSMUST00000197149 515 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.29□□□□□ -1.72
CtcfQ61164 Gm42896-201ENSMUST00000201249 1113 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm18597-201ENSMUST00000209519 694 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm45434-201ENSMUST00000210550 293 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CtcfQ61164 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
CtcfQ61164 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CtcfQ61164 Gm23443-201ENSMUST00000082916 128 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm25481-201ENSMUST00000083221 158 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
CtcfQ61164 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
CtcfQ61164 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CtcfQ61164 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CtcfQ61164 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.29□□□□□ -1.72
CtcfQ61164 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CtcfQ61164 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CtcfQ61164 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CtcfQ61164 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CtcfQ61164 Snora64-201ENSMUST00000104521 134 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Mir190b-201ENSMUST00000104803 80 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CtcfQ61164 Gm12427-201ENSMUST00000117719 302 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm12994-201ENSMUST00000119601 447 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm25913-201ENSMUST00000157617 135 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm26171-201ENSMUST00000158422 131 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm26028-201ENSMUST00000158660 294 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm24224-201ENSMUST00000158828 258 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.28□□□□□ -1.72
CtcfQ61164 Gm16588-201ENSMUST00000162889 355 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm6486-201ENSMUST00000166202 434 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm20648-201ENSMUST00000175815 328 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm22776-201ENSMUST00000178634 94 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm23767-201ENSMUST00000179278 94 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms