Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm19244-201ENSMUST00000204340 253 ntBASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm43954-201ENSMUST00000204634 544 ntBASIC3.6□□□□□ -1.83
Sdf4Q61112 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sdf4Q61112 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm8681-201ENSMUST00000219115 618 ntBASIC3.6□□□□□ -1.83
Sdf4Q61112 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.6□□□□□ -1.83
Sdf4Q61112 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.6□□□□□ -1.83
Sdf4Q61112 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.6□□□□□ -1.83
Sdf4Q61112 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sdf4Q61112 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.6□□□□□ -1.83
Sdf4Q61112 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sdf4Q61112 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm12090-201ENSMUST00000118692 758 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm13228-201ENSMUST00000118937 634 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm11876-201ENSMUST00000120002 269 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm15061-201ENSMUST00000121076 1046 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm25292-201ENSMUST00000122797 322 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm24739-201ENSMUST00000158855 292 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm25817-201ENSMUST00000177758 121 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm24766-201ENSMUST00000179182 121 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm7909-201ENSMUST00000182688 614 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.59□□□□□ -1.83
Sdf4Q61112 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm30674-201ENSMUST00000214523 392 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 AC153522.1-201ENSMUST00000220047 1090 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.59□□□□□ -1.83
Sdf4Q61112 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Snora70-201ENSMUST00000083047 137 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm24928-201ENSMUST00000083399 107 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm25897-201ENSMUST00000083709 107 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm10212-201ENSMUST00000087884 324 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sdf4Q61112 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.59□□□□□ -1.83
Sdf4Q61112 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.59□□□□□ -1.84
Sdf4Q61112 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Sdf4Q61112 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.59□□□□□ -1.84
Sdf4Q61112 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Sdf4Q61112 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.59□□□□□ -1.84
Sdf4Q61112 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.58□□□□□ -1.84
Sdf4Q61112 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm13678-201ENSMUST00000118926 340 ntBASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm5762-201ENSMUST00000119204 258 ntBASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm6584-201ENSMUST00000119671 447 ntBASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.58□□□□□ -1.84
Sdf4Q61112 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm26349-201ENSMUST00000157530 130 ntBASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm23666-201ENSMUST00000158053 116 ntBASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm25438-201ENSMUST00000158281 110 ntBASIC3.58□□□□□ -1.84
Sdf4Q61112 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm7346-201ENSMUST00000169661 476 ntBASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm3454-201ENSMUST00000185571 412 ntBASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm29299-201ENSMUST00000185609 923 ntBASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdf4Q61112 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms