Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Usf1Q61069 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.22□□□□□ -1.89
Usf1Q61069 Gm22043-201ENSMUST00000082993 158 ntBASIC3.22□□□□□ -1.89
Usf1Q61069 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Usf1Q61069 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Usf1Q61069 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.22□□□□□ -1.89
Usf1Q61069 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Usf1Q61069 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Usf1Q61069 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.22□□□□□ -1.89
Usf1Q61069 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.21□□□□□ -1.89
Usf1Q61069 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Usf1Q61069 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Usf1Q61069 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Usf1Q61069 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Usf1Q61069 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Usf1Q61069 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm12889-201ENSMUST00000118684 241 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm12495-201ENSMUST00000119750 447 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Usf1Q61069 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.21□□□□□ -1.9
Usf1Q61069 Gm23753-201ENSMUST00000157575 149 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm22339-201ENSMUST00000157718 62 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm23152-201ENSMUST00000175322 116 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm26991-201ENSMUST00000180950 620 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm28574-201ENSMUST00000185757 699 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm28781-201ENSMUST00000185760 696 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm28339-201ENSMUST00000185845 696 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm29062-201ENSMUST00000186032 694 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm29574-201ENSMUST00000186226 696 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm28828-201ENSMUST00000186601 696 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm28057-201ENSMUST00000186603 615 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm28255-201ENSMUST00000187101 694 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm29307-201ENSMUST00000187367 696 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm28397-201ENSMUST00000187970 699 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm28896-201ENSMUST00000188609 696 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm29545-201ENSMUST00000188878 694 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm29339-201ENSMUST00000189613 696 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm28159-201ENSMUST00000190296 696 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm29366-201ENSMUST00000190481 699 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm29407-201ENSMUST00000191468 696 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.21□□□□□ -1.9
Usf1Q61069 Gm37433-201ENSMUST00000192695 678 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm37441-201ENSMUST00000194430 678 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm38107-201ENSMUST00000194873 696 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm42665-201ENSMUST00000202100 586 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Gm44594-201ENSMUST00000208982 407 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Usf1Q61069 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC3.21□□□□□ -1.9
Usf1Q61069 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Usf1Q61069 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Usf1Q61069 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Usf1Q61069 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Usf1Q61069 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Usf1Q61069 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Usf1Q61069 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Usf1Q61069 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Usf1Q61069 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Usf1Q61069 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Usf1Q61069 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.21□□□□□ -1.9
Usf1Q61069 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Usf1Q61069 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Usf1Q61069 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Usf1Q61069 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Usf1Q61069 Gm26140-201ENSMUST00000103807 110 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Gm23431-201ENSMUST00000104006 107 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Gm13873-201ENSMUST00000119208 427 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Gm22988-201ENSMUST00000122759 144 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Gm6265-201ENSMUST00000149263 231 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Usf1Q61069 Gm26100-201ENSMUST00000157245 127 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Gm22034-201ENSMUST00000157283 134 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Gm24537-201ENSMUST00000157950 102 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Usf1Q61069 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.2□□□□□ -1.9
Usf1Q61069 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Usf1Q61069 Gm6947-201ENSMUST00000186254 78 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Usf1Q61069 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.2□□□□□ -1.9
Usf1Q61069 Gm37085-201ENSMUST00000193780 196 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Gm37002-201ENSMUST00000194560 373 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.2□□□□□ -1.9
Usf1Q61069 Gm43897-201ENSMUST00000204019 309 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Usf1Q61069 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.2□□□□□ -1.9
Usf1Q61069 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.2□□□□□ -1.9
Usf1Q61069 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms