Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm20162-201ENSMUST00000193629 871 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm43142-201ENSMUST00000198670 361 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm44634-201ENSMUST00000206119 152 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm45553-201ENSMUST00000209929 507 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 AC164629.1-201ENSMUST00000220250 1113 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm10042-201ENSMUST00000079884 78 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Snora31-201ENSMUST00000083213 130 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim38Q5SZ99 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm11869-201ENSMUST00000118701 329 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm14898-201ENSMUST00000120202 645 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm14989-201ENSMUST00000120497 207 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm13676-201ENSMUST00000122185 591 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm23754-201ENSMUST00000157576 63 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm8498-201ENSMUST00000188227 974 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm8242-202ENSMUST00000193056 475 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm34091-201ENSMUST00000200875 604 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm44650-201ENSMUST00000206929 194 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm45696-201ENSMUST00000212088 985 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Snora70-201ENSMUST00000083047 137 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.78□□□□□ -1.8
Trim38Q5SZ99 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim38Q5SZ99 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Mir291a-201ENSMUST00000104815 82 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm12578-201ENSMUST00000121244 417 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm14368-201ENSMUST00000145305 415 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm23112-201ENSMUST00000158606 125 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm27342-201ENSMUST00000183530 109 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Mir6411-201ENSMUST00000183556 108 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm6947-201ENSMUST00000186254 78 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm38149-201ENSMUST00000191943 339 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Trbv8-201ENSMUST00000194020 285 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm43441-201ENSMUST00000201458 205 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm19244-201ENSMUST00000204340 253 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm6842-201ENSMUST00000211361 390 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm45796-201ENSMUST00000212483 114 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm25205-201ENSMUST00000082841 103 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Trim38Q5SZ99 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.76□□□□□ -1.81
Trim38Q5SZ99 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.76□□□□□ -1.81
Trim38Q5SZ99 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim38Q5SZ99 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
Trim38Q5SZ99 Mir706-201ENSMUST00000102262 84 ntBASIC3.76□□□□□ -1.81
Trim38Q5SZ99 Mir667-201ENSMUST00000102441 92 ntBASIC3.76□□□□□ -1.81
Trim38Q5SZ99 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.76□□□□□ -1.81
Trim38Q5SZ99 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC3.76□□□□□ -1.81
Trim38Q5SZ99 Gm15090-201ENSMUST00000118787 1196 ntBASIC3.76□□□□□ -1.81
Trim38Q5SZ99 Gm14253-201ENSMUST00000122112 639 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms