Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm17063-201ENSMUST00000168135 456 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm17711-201ENSMUST00000172028 237 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Mir3076-201ENSMUST00000175415 60 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm28900-201ENSMUST00000185232 156 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm28574-201ENSMUST00000185757 699 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm28596-201ENSMUST00000185870 696 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm28057-201ENSMUST00000186603 615 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm28397-201ENSMUST00000187970 699 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm29366-201ENSMUST00000190481 699 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm32295-201ENSMUST00000192558 696 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm31260-201ENSMUST00000193478 696 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc88aQ5SNZ0 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm24274-201ENSMUST00000116787 124 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm8260-201ENSMUST00000119230 353 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm14821-201ENSMUST00000121975 435 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm22551-201ENSMUST00000157795 103 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm21139-201ENSMUST00000186594 877 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm37720-201ENSMUST00000195497 1241 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm8209-201ENSMUST00000206386 553 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm8074-201ENSMUST00000095071 252 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm24382-201ENSMUST00000122698 107 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm3370-201ENSMUST00000171785 500 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm19203-201ENSMUST00000174049 939 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm45778-201ENSMUST00000211959 153 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm23377-201ENSMUST00000082943 126 ntBASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Ccdc88aQ5SNZ0 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm12787-201ENSMUST00000119234 396 ntBASIC3.36□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm22961-201ENSMUST00000157964 106 ntBASIC3.36□□□□□ -1.87
Ccdc88aQ5SNZ0 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC3.36□□□□□ -1.87
Ccdc88aQ5SNZ0 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.36□□□□□ -1.87
Ccdc88aQ5SNZ0 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm44092-201ENSMUST00000204470 258 ntBASIC3.36□□□□□ -1.87
Ccdc88aQ5SNZ0 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc88aQ5SNZ0 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc88aQ5SNZ0 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ccdc88aQ5SNZ0 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.36□□□□□ -1.87
Ccdc88aQ5SNZ0 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm14791-201ENSMUST00000119061 1166 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm15225-201ENSMUST00000120449 1017 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm22600-201ENSMUST00000157598 269 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm24561-201ENSMUST00000175182 95 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm29475-201ENSMUST00000190767 312 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm4017-201ENSMUST00000084813 338 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm24671-201ENSMUST00000104159 158 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm21991-201ENSMUST00000180006 508 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm29356-201ENSMUST00000186935 373 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm19694-201ENSMUST00000192364 505 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm43476-201ENSMUST00000197873 405 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm18617-201ENSMUST00000222311 259 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.35□□□□□ -1.87
Ccdc88aQ5SNZ0 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm23230-201ENSMUST00000157298 133 ntBASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm25476-201ENSMUST00000175125 185 ntBASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm22108-201ENSMUST00000177961 106 ntBASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm24798-201ENSMUST00000179334 106 ntBASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm21742-201ENSMUST00000189352 548 ntBASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Gm19269-201ENSMUST00000211401 804 ntBASIC3.34□□□□□ -1.87
Ccdc88aQ5SNZ0 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms