Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim41Q5NCC3 Gm37056-201ENSMUST00000192141 1865 ntBASIC9.16□□□□□ -0.94
Trim41Q5NCC3 Gm18913-201ENSMUST00000204311 1789 ntBASIC9.16□□□□□ -0.94
Trim41Q5NCC3 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Trim41Q5NCC3 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trim41Q5NCC3 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trim41Q5NCC3 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Trim41Q5NCC3 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 AC123858.1-201ENSMUST00000226948 1874 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Snord98-201ENSMUST00000116819 65 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm14753-201ENSMUST00000118503 246 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm14298-201ENSMUST00000139032 237 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm16356-201ENSMUST00000143300 169 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm22389-201ENSMUST00000158193 301 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm28921-201ENSMUST00000190219 378 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Mir6516-201ENSMUST00000196236 110 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Mir3535-201ENSMUST00000197651 147 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm45327-201ENSMUST00000211612 565 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm7093-201ENSMUST00000223004 581 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm22293-201ENSMUST00000083314 109 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm23845-201ENSMUST00000083834 152 ntBASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trim41Q5NCC3 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
Trim41Q5NCC3 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Trim41Q5NCC3 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm33378-201ENSMUST00000219831 2758 ntBASIC9.14□□□□□ -0.95
Trim41Q5NCC3 AC137842.3-201ENSMUST00000228855 2397 ntBASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm26018-201ENSMUST00000104406 128 ntBASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm14688-201ENSMUST00000119169 303 ntBASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm30280-201ENSMUST00000192214 262 ntBASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm44214-201ENSMUST00000204153 606 ntBASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm44922-201ENSMUST00000206690 90 ntBASIC9.14□□□□□ -0.95
Trim41Q5NCC3 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 AC113031.4-201ENSMUST00000228381 514 ntBASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm25801-201ENSMUST00000082638 106 ntBASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm23460-201ENSMUST00000083258 109 ntBASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm22829-201ENSMUST00000083771 106 ntBASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm42702-201ENSMUST00000199515 4217 ntBASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trim41Q5NCC3 Gm5155-201ENSMUST00000072381 2841 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Gm43567-201ENSMUST00000197581 1978 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Gm15357-201ENSMUST00000119160 285 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Gm25956-201ENSMUST00000175115 217 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Gm22114-201ENSMUST00000177756 107 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Gm21232-201ENSMUST00000182187 1006 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Gm37701-201ENSMUST00000192947 1100 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Gm42566-201ENSMUST00000197120 643 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Gm19761-201ENSMUST00000205372 391 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 AC147633.1-201ENSMUST00000225134 259 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 CT025686.1-201ENSMUST00000227592 438 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Gm8074-201ENSMUST00000095071 252 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 AC162908.1-201ENSMUST00000219164 4563 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trim41Q5NCC3 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Trim41Q5NCC3 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trim41Q5NCC3 AC154640.4-201ENSMUST00000226647 4640 ntBASIC9.12□□□□□ -0.95
Trim41Q5NCC3 Gm22936-201ENSMUST00000103955 126 ntBASIC9.12□□□□□ -0.95
Trim41Q5NCC3 Gm24792-201ENSMUST00000104286 128 ntBASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 148.2 ms