Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm23587-201ENSMUST00000157658 84 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm24811-201ENSMUST00000175313 100 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm20672-201ENSMUST00000176605 261 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Usp28Q5I043 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Usp28Q5I043 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm28438-201ENSMUST00000188299 345 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm20776-201ENSMUST00000189940 700 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
Usp28Q5I043 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm45312-201ENSMUST00000210566 311 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm30674-201ENSMUST00000214523 392 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Usp28Q5I043 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.43□□□□□ -1.86
Usp28Q5I043 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.43□□□□□ -1.86
Usp28Q5I043 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Usp28Q5I043 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Usp28Q5I043 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm23975-201ENSMUST00000082685 106 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Gm23846-201ENSMUST00000083835 107 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Usp28Q5I043 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Usp28Q5I043 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.43□□□□□ -1.86
Usp28Q5I043 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Usp28Q5I043 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Usp28Q5I043 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Usp28Q5I043 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm14554-201ENSMUST00000119548 661 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm25185-201ENSMUST00000157754 96 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm25977-201ENSMUST00000158697 85 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm16569-201ENSMUST00000160526 314 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.42□□□□□ -1.86
Usp28Q5I043 Mir5123-201ENSMUST00000177794 83 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm37085-201ENSMUST00000193780 196 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm38268-201ENSMUST00000195813 193 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm44059-201ENSMUST00000204048 351 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm44824-201ENSMUST00000207021 229 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm9373-201ENSMUST00000208724 599 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.42□□□□□ -1.86
Usp28Q5I043 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC3.42□□□□□ -1.86
Usp28Q5I043 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm26203-201ENSMUST00000082911 114 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Gm26064-201ENSMUST00000083381 109 ntBASIC3.42□□□□□ -1.86
Usp28Q5I043 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Usp28Q5I043 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Usp28Q5I043 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Usp28Q5I043 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.42□□□□□ -1.86
Usp28Q5I043 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Usp28Q5I043 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Usp28Q5I043 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Usp28Q5I043 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
Usp28Q5I043 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm11576-201ENSMUST00000117433 417 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm11874-201ENSMUST00000117437 130 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm14599-201ENSMUST00000120469 474 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm23326-201ENSMUST00000157419 105 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm22693-201ENSMUST00000175049 442 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm8807-201ENSMUST00000179328 492 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm26585-201ENSMUST00000180890 630 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm1833-201ENSMUST00000191608 682 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm37098-201ENSMUST00000192290 244 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm33973-201ENSMUST00000195148 534 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm32381-201ENSMUST00000203192 476 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm44030-201ENSMUST00000204865 432 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm45420-201ENSMUST00000211243 425 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm7530-201ENSMUST00000218466 605 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm16419-201ENSMUST00000221057 625 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm18441-201ENSMUST00000223539 617 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.41□□□□□ -1.86
Usp28Q5I043 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp28Q5I043 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms