Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm27648-201ENSMUST00000184315 107 ntBASIC3.6□□□□□ -1.83
Shank3Q4ACU6 Gm28871-201ENSMUST00000186191 687 ntBASIC3.6□□□□□ -1.83
Shank3Q4ACU6 Gm18698-201ENSMUST00000192327 668 ntBASIC3.6□□□□□ -1.83
Shank3Q4ACU6 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.6□□□□□ -1.83
Shank3Q4ACU6 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.6□□□□□ -1.83
Shank3Q4ACU6 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.6□□□□□ -1.83
Shank3Q4ACU6 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Shank3Q4ACU6 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Shank3Q4ACU6 Gm10343-201ENSMUST00000096279 348 ntBASIC3.6□□□□□ -1.83
Shank3Q4ACU6 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Shank3Q4ACU6 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.6□□□□□ -1.83
Shank3Q4ACU6 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Shank3Q4ACU6 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.59□□□□□ -1.83
Shank3Q4ACU6 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Shank3Q4ACU6 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Shank3Q4ACU6 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC3.59□□□□□ -1.83
Shank3Q4ACU6 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.59□□□□□ -1.83
Shank3Q4ACU6 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.59□□□□□ -1.83
Shank3Q4ACU6 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.59□□□□□ -1.83
Shank3Q4ACU6 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Shank3Q4ACU6 Gm28500-201ENSMUST00000190286 151 ntBASIC3.59□□□□□ -1.83
Shank3Q4ACU6 Gm36994-201ENSMUST00000192941 492 ntBASIC3.59□□□□□ -1.83
Shank3Q4ACU6 Gm43655-201ENSMUST00000197367 222 ntBASIC3.59□□□□□ -1.83
Shank3Q4ACU6 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.59□□□□□ -1.83
Shank3Q4ACU6 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.59□□□□□ -1.83
Shank3Q4ACU6 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.59□□□□□ -1.83
Shank3Q4ACU6 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.59□□□□□ -1.83
Shank3Q4ACU6 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Shank3Q4ACU6 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.59□□□□□ -1.83
Shank3Q4ACU6 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm11253-201ENSMUST00000118486 201 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm13440-201ENSMUST00000121665 496 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm24075-201ENSMUST00000158175 72 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Trbv10-201ENSMUST00000168322 289 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm27315-201ENSMUST00000183977 154 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Mir7026-201ENSMUST00000184384 67 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm28923-201ENSMUST00000187755 322 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm37377-201ENSMUST00000191733 304 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Snora36b-201ENSMUST00000104383 132 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm13406-201ENSMUST00000121991 256 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm14578-201ENSMUST00000122166 391 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm24885-201ENSMUST00000158783 270 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm37111-201ENSMUST00000193250 634 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm32175-201ENSMUST00000193641 346 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Gm44030-201ENSMUST00000204865 432 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Shank3Q4ACU6 AC105169.1-201ENSMUST00000218912 1294 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 AC122295.1-201ENSMUST00000223476 388 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.58□□□□□ -1.84
Shank3Q4ACU6 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Gm23213-201ENSMUST00000122715 313 ntBASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Gm23670-201ENSMUST00000157469 119 ntBASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Gm24053-201ENSMUST00000158620 105 ntBASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Mir3473a-201ENSMUST00000175011 78 ntBASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Mir7013-201ENSMUST00000183540 72 ntBASIC3.57□□□□□ -1.84
Shank3Q4ACU6 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Gm34091-201ENSMUST00000200875 604 ntBASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Shank3Q4ACU6 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Gm26387-201ENSMUST00000104238 132 ntBASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Gm24382-201ENSMUST00000122698 107 ntBASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Gm22361-201ENSMUST00000158435 176 ntBASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Gm18327-201ENSMUST00000202426 830 ntBASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Gm37470-201ENSMUST00000193378 2798 ntBASIC3.56□□□□□ -1.84
Shank3Q4ACU6 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms