Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm23471-201ENSMUST00000177886 79 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm26488-201ENSMUST00000178225 79 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm26465-201ENSMUST00000178517 107 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm24317-201ENSMUST00000178536 107 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm25021-201ENSMUST00000179184 107 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm23449-201ENSMUST00000179208 79 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm22995-201ENSMUST00000179670 107 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm24424-201ENSMUST00000179714 107 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm24389-201ENSMUST00000179962 107 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm25221-201ENSMUST00000180051 79 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm25672-201ENSMUST00000180111 107 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm26988-201ENSMUST00000183296 945 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm29163-201ENSMUST00000188029 107 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm4052-201ENSMUST00000220890 451 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm18921-201ENSMUST00000221798 366 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm22979-201ENSMUST00000082609 159 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm24144-201ENSMUST00000082632 111 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm23815-201ENSMUST00000083231 107 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Gm23520-201ENSMUST00000093736 107 ntBASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Upf3aQ3ULJ3 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Mir1198-201ENSMUST00000116995 121 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm12392-201ENSMUST00000118014 938 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm7350-201ENSMUST00000120964 636 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm14589-201ENSMUST00000121640 727 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm15986-201ENSMUST00000122153 400 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm15466-201ENSMUST00000122299 333 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm25047-201ENSMUST00000122667 104 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm27445-201ENSMUST00000184484 72 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm27538-201ENSMUST00000185065 294 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm29534-201ENSMUST00000187328 382 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm28113-201ENSMUST00000188280 229 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm37193-201ENSMUST00000193087 513 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Upf3aQ3ULJ3 Gm43216-201ENSMUST00000196295 1333 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm27893-201ENSMUST00000184408 194 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm28594-201ENSMUST00000187022 661 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm28358-202ENSMUST00000189292 223 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm37319-201ENSMUST00000193500 636 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm19418-201ENSMUST00000197436 580 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm43214-201ENSMUST00000199242 352 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm18388-201ENSMUST00000222339 557 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Upf3aQ3ULJ3 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.43□□□□□ -1.86
Upf3aQ3ULJ3 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Upf3aQ3ULJ3 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms