Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm27648-201ENSMUST00000184315 107 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm44355-201ENSMUST00000200417 104 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm43659-201ENSMUST00000200894 628 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm43897-201ENSMUST00000204019 309 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm7407-201ENSMUST00000208301 568 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm19709-201ENSMUST00000215403 482 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Mir101b-201ENSMUST00000083622 97 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trafd1Q3UDK1 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm11913-201ENSMUST00000119094 336 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm28314-201ENSMUST00000191276 345 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm38149-201ENSMUST00000191943 339 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm6680-201ENSMUST00000192789 950 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm5309-201ENSMUST00000197416 677 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm5317-201ENSMUST00000204445 847 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm44824-201ENSMUST00000207021 229 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trafd1Q3UDK1 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Mir673-201ENSMUST00000102361 91 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm2348-201ENSMUST00000108782 300 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm16100-201ENSMUST00000120489 231 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm13419-201ENSMUST00000121711 271 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm23667-201ENSMUST00000157466 120 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm23773-201ENSMUST00000158985 296 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm21638-201ENSMUST00000179473 836 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm27522-201ENSMUST00000183949 230 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm29452-201ENSMUST00000187996 313 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm28860-201ENSMUST00000188103 313 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm7182-201ENSMUST00000193351 732 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm17966-201ENSMUST00000193453 594 ntBASIC3.38□□□□□ -1.87
Trafd1Q3UDK1 Gm7897-201ENSMUST00000193981 554 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms