Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm7497-201ENSMUST00000183064 1003 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm37343-201ENSMUST00000192542 111 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm43367-201ENSMUST00000199986 625 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm43028-201ENSMUST00000202561 481 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm43925-201ENSMUST00000203498 206 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm45162-201ENSMUST00000209013 618 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm3690-201ENSMUST00000211341 262 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm45742-201ENSMUST00000212400 433 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 AC166343.1-201ENSMUST00000213261 577 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 AC125379.1-201ENSMUST00000221928 111 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm5374-201ENSMUST00000222868 657 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm22265-201ENSMUST00000082947 116 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm25818-201ENSMUST00000083282 164 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddb1Q3U1J4 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Mir465c-2-201ENSMUST00000104757 81 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm11876-201ENSMUST00000120002 269 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm11420-201ENSMUST00000120047 402 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm12276-201ENSMUST00000121709 301 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm14903-201ENSMUST00000122435 537 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 n-R5s68-201ENSMUST00000122639 82 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm22380-201ENSMUST00000157479 95 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm43708-201ENSMUST00000198857 961 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm4528-201ENSMUST00000207905 551 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm23302-201ENSMUST00000082710 100 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Mir465c-1-201ENSMUST00000093560 81 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 AC154511.1-201ENSMUST00000222578 1587 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.16□□□□□ -1.58
Ddb1Q3U1J4 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.15□□□□□ -1.58
Ddb1Q3U1J4 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.15□□□□□ -1.58
Ddb1Q3U1J4 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ddb1Q3U1J4 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Ddb1Q3U1J4 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Ddb1Q3U1J4 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.15□□□□□ -1.58
Ddb1Q3U1J4 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Ddb1Q3U1J4 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.15□□□□□ -1.58
Ddb1Q3U1J4 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm24831-201ENSMUST00000116778 126 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm15266-201ENSMUST00000119635 255 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm13743-201ENSMUST00000121486 724 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm22345-201ENSMUST00000122644 107 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm16566-201ENSMUST00000160387 910 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm23568-201ENSMUST00000177960 92 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm24829-201ENSMUST00000179245 92 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm29600-201ENSMUST00000188687 377 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm42622-201ENSMUST00000197229 355 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm32381-201ENSMUST00000203192 476 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm44824-201ENSMUST00000207021 229 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm18903-201ENSMUST00000215343 480 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 AC101677.1-201ENSMUST00000218590 158 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 CT030184.1-201ENSMUST00000222393 416 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 AC109172.2-201ENSMUST00000228792 381 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Gm23460-201ENSMUST00000083258 109 ntBASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms