Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Usp39Q3TIX9 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Usp39Q3TIX9 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Usp39Q3TIX9 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.45□□□□□ -1.7
Usp39Q3TIX9 Gm37096-201ENSMUST00000192317 2058 ntBASIC4.45□□□□□ -1.7
Usp39Q3TIX9 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Usp39Q3TIX9 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Usp39Q3TIX9 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Usp39Q3TIX9 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Usp39Q3TIX9 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 AC160115.1-201ENSMUST00000224678 1574 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm24125-201ENSMUST00000104105 137 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm23608-201ENSMUST00000104545 128 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm14304-201ENSMUST00000117272 446 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm14558-201ENSMUST00000117458 381 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm12760-201ENSMUST00000117861 482 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm11408-201ENSMUST00000117889 519 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm5391-201ENSMUST00000121155 613 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm4852-201ENSMUST00000121202 729 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm13356-201ENSMUST00000121678 335 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm23118-201ENSMUST00000122657 187 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm25103-201ENSMUST00000122671 318 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm22819-201ENSMUST00000157445 303 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm23906-201ENSMUST00000157573 128 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm22789-201ENSMUST00000157884 130 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm24192-201ENSMUST00000157978 145 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm5258-201ENSMUST00000165437 327 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm23648-201ENSMUST00000180301 107 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm26556-201ENSMUST00000180645 320 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Mir6899-201ENSMUST00000184798 64 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm28615-201ENSMUST00000187527 482 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm29610-201ENSMUST00000187749 453 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm21735-201ENSMUST00000190360 696 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm33973-201ENSMUST00000195148 534 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm38234-201ENSMUST00000195204 421 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm43825-201ENSMUST00000199650 734 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm45588-201ENSMUST00000211213 630 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm18703-201ENSMUST00000215318 333 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 AC117588.2-201ENSMUST00000228340 311 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm10916-201ENSMUST00000080330 483 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm23506-201ENSMUST00000083077 107 ntBASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Usp39Q3TIX9 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm12285-201ENSMUST00000117347 233 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm12112-201ENSMUST00000117772 231 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm27676-201ENSMUST00000183669 61 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Mir6391-201ENSMUST00000184391 104 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm37658-201ENSMUST00000192672 315 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm37881-201ENSMUST00000193001 421 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm6510-201ENSMUST00000195916 574 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm5551-201ENSMUST00000199720 690 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm45236-201ENSMUST00000208632 229 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm18487-201ENSMUST00000215826 878 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Snora52-201ENSMUST00000082732 137 ntBASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Usp39Q3TIX9 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 124.7 ms