Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col9a1Q05722 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col9a1Q05722 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.86□□□□□ -1.47
Col9a1Q05722 Sec24c-202ENSMUST00000223751 4196 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.85□□□□□ -1.47
Col9a1Q05722 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Col9a1Q05722 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm13137-201ENSMUST00000118035 345 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm14875-201ENSMUST00000120881 319 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm12396-201ENSMUST00000121600 306 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm24961-201ENSMUST00000157918 184 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm3851-201ENSMUST00000168653 318 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm25020-201ENSMUST00000178071 107 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Mir3620-201ENSMUST00000184710 61 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.85□□□□□ -1.47
Col9a1Q05722 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm37103-201ENSMUST00000191830 115 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm37670-201ENSMUST00000193622 229 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Igkv9-128-201ENSMUST00000196602 353 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.85□□□□□ -1.47
Col9a1Q05722 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC5.85□□□□□ -1.47
Col9a1Q05722 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.85□□□□□ -1.47
Col9a1Q05722 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm7065-201ENSMUST00000222150 474 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 AC108416.2-201ENSMUST00000226792 367 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 AC154276.2-201ENSMUST00000227707 309 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm24041-201ENSMUST00000083115 156 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
Col9a1Q05722 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col9a1Q05722 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col9a1Q05722 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm5702-201ENSMUST00000185629 2469 ntBASIC5.85□□□□□ -1.47
Col9a1Q05722 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Col9a1Q05722 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col9a1Q05722 Gm38218-201ENSMUST00000193555 4689 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Col9a1Q05722 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col9a1Q05722 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col9a1Q05722 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.84□□□□□ -1.47
Col9a1Q05722 AC138765.2-202ENSMUST00000228418 3435 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 BC051076-202ENSMUST00000199477 2868 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm20768-201ENSMUST00000199527 2338 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col9a1Q05722 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm13681-201ENSMUST00000117925 210 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm3267-201ENSMUST00000118671 473 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm11429-201ENSMUST00000119089 144 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm22315-201ENSMUST00000158010 143 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm17100-201ENSMUST00000168963 272 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Mir6960-201ENSMUST00000183449 61 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Mir7222-201ENSMUST00000183740 75 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm37636-201ENSMUST00000193583 359 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm9442-201ENSMUST00000194242 319 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm29778-201ENSMUST00000201667 466 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm44010-201ENSMUST00000204432 331 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm45539-201ENSMUST00000210313 428 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC5.84□□□□□ -1.47
Col9a1Q05722 AC115735.2-201ENSMUST00000227135 351 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 AC115291.2-201ENSMUST00000228335 437 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm22062-201ENSMUST00000082563 107 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Gm42659-201ENSMUST00000196955 1754 ntBASIC5.84□□□□□ -1.47
Col9a1Q05722 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Col9a1Q05722 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col9a1Q05722 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col9a1Q05722 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Col9a1Q05722 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col9a1Q05722 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Col9a1Q05722 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
Col9a1Q05722 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col9a1Q05722 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col9a1Q05722 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col9a1Q05722 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Col9a1Q05722 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.83□□□□□ -1.48
Col9a1Q05722 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col9a1Q05722 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col9a1Q05722 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Col9a1Q05722 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC5.83□□□□□ -1.48
Col9a1Q05722 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col9a1Q05722 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col9a1Q05722 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms