Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm23540-201ENSMUST00000157543 164 ntBASIC4.07□□□□□ -1.76
CiitaP79621 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC4.07□□□□□ -1.76
CiitaP79621 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.07□□□□□ -1.76
CiitaP79621 Gm6395-201ENSMUST00000167639 691 ntBASIC4.07□□□□□ -1.76
CiitaP79621 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CiitaP79621 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.07□□□□□ -1.76
CiitaP79621 Gm36934-201ENSMUST00000192007 306 ntBASIC4.07□□□□□ -1.76
CiitaP79621 Gm44475-201ENSMUST00000204041 424 ntBASIC4.07□□□□□ -1.76
CiitaP79621 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.07□□□□□ -1.76
CiitaP79621 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.07□□□□□ -1.76
CiitaP79621 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CiitaP79621 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CiitaP79621 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CiitaP79621 Gm25800-201ENSMUST00000082636 134 ntBASIC4.07□□□□□ -1.76
CiitaP79621 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.07□□□□□ -1.76
CiitaP79621 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CiitaP79621 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CiitaP79621 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.07□□□□□ -1.76
CiitaP79621 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CiitaP79621 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CiitaP79621 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CiitaP79621 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CiitaP79621 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
CiitaP79621 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CiitaP79621 Gm7974-201ENSMUST00000117154 408 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gm15180-201ENSMUST00000117745 492 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CiitaP79621 Gm11869-201ENSMUST00000118701 329 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gm12873-201ENSMUST00000119988 422 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.06□□□□□ -1.76
CiitaP79621 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC4.06□□□□□ -1.76
CiitaP79621 Gm22840-201ENSMUST00000158444 136 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gm20399-201ENSMUST00000174652 132 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gm22307-201ENSMUST00000180019 107 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gm19637-201ENSMUST00000185933 579 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gm28255-201ENSMUST00000187101 694 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CiitaP79621 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC4.06□□□□□ -1.76
CiitaP79621 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.06□□□□□ -1.76
CiitaP79621 Gm37599-201ENSMUST00000193067 489 ntBASIC4.06□□□□□ -1.76
CiitaP79621 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CiitaP79621 Gm43155-201ENSMUST00000202661 494 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gm6064-201ENSMUST00000203999 454 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.06□□□□□ -1.76
CiitaP79621 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.06□□□□□ -1.76
CiitaP79621 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Gm9628-201ENSMUST00000222169 725 ntBASIC4.06□□□□□ -1.76
CiitaP79621 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CiitaP79621 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CiitaP79621 Snord15a-201ENSMUST00000083888 148 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CiitaP79621 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CiitaP79621 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CiitaP79621 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CiitaP79621 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
CiitaP79621 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CiitaP79621 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.06□□□□□ -1.76
CiitaP79621 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CiitaP79621 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CiitaP79621 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.05□□□□□ -1.76
CiitaP79621 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CiitaP79621 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CiitaP79621 Gm6913-201ENSMUST00000100019 348 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm14816-201ENSMUST00000117174 294 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm7429-201ENSMUST00000118664 348 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm11829-201ENSMUST00000121003 282 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm25105-201ENSMUST00000122477 130 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CiitaP79621 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
CiitaP79621 Gm3123-201ENSMUST00000163480 480 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CiitaP79621 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm23152-201ENSMUST00000175322 116 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm22108-201ENSMUST00000177961 106 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Spin2g-201ENSMUST00000178425 687 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm24798-201ENSMUST00000179334 106 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm28010-201ENSMUST00000179485 126 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC4.05□□□□□ -1.76
CiitaP79621 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC4.05□□□□□ -1.76
CiitaP79621 Gm37438-201ENSMUST00000192813 393 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm44387-201ENSMUST00000196298 145 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm43070-201ENSMUST00000196938 415 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm43405-201ENSMUST00000198642 337 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm42526-201ENSMUST00000198956 393 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm19253-201ENSMUST00000204279 307 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm43954-201ENSMUST00000204634 544 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm45146-201ENSMUST00000207108 221 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm44611-201ENSMUST00000207507 355 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
CiitaP79621 Gm18729-201ENSMUST00000217230 621 ntBASIC4.05□□□□□ -1.76
CiitaP79621 Gm18228-201ENSMUST00000217297 1091 ntBASIC4.05□□□□□ -1.76
CiitaP79621 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.05□□□□□ -1.76
CiitaP79621 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CiitaP79621 Gm8785-201ENSMUST00000220259 487 ntBASIC4.05□□□□□ -1.76
CiitaP79621 AC154552.5-201ENSMUST00000222352 207 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms