Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Shmt1P50431 Gm23905-201ENSMUST00000157568 109 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm22211-201ENSMUST00000158097 156 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm22765-201ENSMUST00000158371 128 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm25264-201ENSMUST00000158519 117 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm24550-201ENSMUST00000158648 279 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm22668-201ENSMUST00000158716 260 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm16545-201ENSMUST00000161968 463 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm20794-201ENSMUST00000177626 628 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm21070-201ENSMUST00000182425 985 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm27457-201ENSMUST00000184771 156 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm29031-201ENSMUST00000185316 614 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm29000-201ENSMUST00000185444 614 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm28204-201ENSMUST00000185934 614 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm28290-201ENSMUST00000186505 614 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm28161-201ENSMUST00000186669 614 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm28749-209ENSMUST00000189599 614 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm29479-201ENSMUST00000190352 455 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm33163-201ENSMUST00000194504 614 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm42830-201ENSMUST00000196642 313 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm36382-201ENSMUST00000198892 541 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm29754-201ENSMUST00000206269 358 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.67□□□□□ -1.66
Shmt1P50431 Gm2059-201ENSMUST00000212025 287 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.67□□□□□ -1.66
Shmt1P50431 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.67□□□□□ -1.66
Shmt1P50431 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.67□□□□□ -1.66
Shmt1P50431 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Shmt1P50431 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Shmt1P50431 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Shmt1P50431 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.67□□□□□ -1.66
Shmt1P50431 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.67□□□□□ -1.66
Shmt1P50431 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.67□□□□□ -1.66
Shmt1P50431 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Shmt1P50431 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Shmt1P50431 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Shmt1P50431 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Shmt1P50431 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.66□□□□□ -1.66
Shmt1P50431 Gm22488-201ENSMUST00000116811 127 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm5942-201ENSMUST00000120046 439 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm14655-201ENSMUST00000120124 578 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm22480-201ENSMUST00000122568 128 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm24836-201ENSMUST00000122609 108 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.66□□□□□ -1.66
Shmt1P50431 Gm23121-201ENSMUST00000157653 173 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm25447-201ENSMUST00000158997 128 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Shmt1P50431 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Shmt1P50431 Gm26335-201ENSMUST00000178449 107 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Shmt1P50431 Mir3620-201ENSMUST00000184710 61 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm43406-201ENSMUST00000200356 334 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm44523-201ENSMUST00000205616 417 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Shmt1P50431 Gm18903-201ENSMUST00000215343 480 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm7753-201ENSMUST00000221007 867 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm8231-201ENSMUST00000221617 783 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.66□□□□□ -1.66
Shmt1P50431 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.66□□□□□ -1.66
Shmt1P50431 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Shmt1P50431 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Shmt1P50431 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Shmt1P50431 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Shmt1P50431 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Shmt1P50431 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.66□□□□□ -1.66
Shmt1P50431 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Shmt1P50431 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Shmt1P50431 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Shmt1P50431 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Shmt1P50431 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Shmt1P50431 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.65□□□□□ -1.66
Shmt1P50431 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
Shmt1P50431 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Shmt1P50431 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.65□□□□□ -1.66
Shmt1P50431 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Shmt1P50431 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.65□□□□□ -1.66
Shmt1P50431 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.65□□□□□ -1.66
Shmt1P50431 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Shmt1P50431 Gm26367-201ENSMUST00000104165 132 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Gm24608-201ENSMUST00000104381 136 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Shmt1P50431 Gm9308-201ENSMUST00000119073 448 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Shmt1P50431 Gm25706-201ENSMUST00000157828 247 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms