Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC4.26□□□□□ -1.73
Traf1P39428 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Gm5265-201ENSMUST00000076828 342 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Traf1P39428 Gm25581-201ENSMUST00000083410 164 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Traf1P39428 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.26□□□□□ -1.73
Traf1P39428 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Traf1P39428 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Traf1P39428 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Traf1P39428 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Traf1P39428 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Traf1P39428 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Traf1P39428 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Traf1P39428 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Traf1P39428 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Traf1P39428 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Traf1P39428 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Traf1P39428 Gm12509-201ENSMUST00000118033 609 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm2003-201ENSMUST00000118537 636 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm11869-201ENSMUST00000118701 329 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm14975-201ENSMUST00000118741 664 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm13155-201ENSMUST00000119277 646 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm6079-201ENSMUST00000121356 404 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm8178-201ENSMUST00000121570 646 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm1989-201ENSMUST00000126244 636 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm13194-201ENSMUST00000142299 311 ntBASIC4.25□□□□□ -1.73
Traf1P39428 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Traf1P39428 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC4.25□□□□□ -1.73
Traf1P39428 Gm22792-201ENSMUST00000157225 133 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm23755-201ENSMUST00000157578 343 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm23591-201ENSMUST00000157663 286 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Mup-ps7-201ENSMUST00000178292 545 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Mup-ps8-201ENSMUST00000178663 545 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Mup-ps9-201ENSMUST00000178847 545 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm24520-201ENSMUST00000179510 110 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Mup-ps6-201ENSMUST00000179564 545 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Mir7047-201ENSMUST00000184595 64 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Traf1P39428 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Olfr1055-202ENSMUST00000188023 939 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC4.25□□□□□ -1.73
Traf1P39428 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC4.25□□□□□ -1.73
Traf1P39428 Gm44355-201ENSMUST00000200417 104 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm43039-201ENSMUST00000202883 963 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC4.25□□□□□ -1.73
Traf1P39428 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.25□□□□□ -1.73
Traf1P39428 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.25□□□□□ -1.73
Traf1P39428 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Traf1P39428 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Traf1P39428 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Traf1P39428 Gm23925-201ENSMUST00000082471 132 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm22293-201ENSMUST00000083314 109 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm21286-201ENSMUST00000098035 545 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Gm42852-201ENSMUST00000202649 1379 ntBASIC4.25□□□□□ -1.73
Traf1P39428 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Traf1P39428 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC4.24□□□□□ -1.73
Traf1P39428 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Traf1P39428 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.24□□□□□ -1.73
Traf1P39428 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Traf1P39428 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Traf1P39428 Gm24403-201ENSMUST00000104616 130 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Gm14931-201ENSMUST00000111079 253 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Gm13076-201ENSMUST00000118041 204 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Gm11923-201ENSMUST00000118135 508 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Gm11876-201ENSMUST00000120002 269 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Gm15157-201ENSMUST00000121852 702 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC4.24□□□□□ -1.73
Traf1P39428 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.24□□□□□ -1.73
Traf1P39428 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Traf1P39428 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.24□□□□□ -1.73
Traf1P39428 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC4.24□□□□□ -1.73
Traf1P39428 Gm37431-201ENSMUST00000195102 111 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Gm43142-201ENSMUST00000198670 361 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Gm43493-201ENSMUST00000199837 202 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Traf1P39428 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Traf1P39428 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.24□□□□□ -1.73
Traf1P39428 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.24□□□□□ -1.73
Traf1P39428 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.24□□□□□ -1.73
Traf1P39428 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC4.24□□□□□ -1.73
Traf1P39428 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.24□□□□□ -1.73
Traf1P39428 AC117656.3-204ENSMUST00000225656 859 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Traf1P39428 Gm22245-201ENSMUST00000082479 103 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Snora7a-201ENSMUST00000082629 140 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Gm24147-201ENSMUST00000082763 144 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Snora31-201ENSMUST00000083213 130 ntBASIC4.24□□□□□ -1.73
Traf1P39428 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Traf1P39428 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Traf1P39428 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Traf1P39428 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Traf1P39428 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Traf1P39428 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Traf1P39428 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Traf1P39428 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Traf1P39428 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms