Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC4.8□□□□□ -1.64
Lig1P37913 Gm44961-201ENSMUST00000207450 196 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Gm44754-201ENSMUST00000208155 400 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Gm44543-201ENSMUST00000209136 396 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC4.8□□□□□ -1.64
Lig1P37913 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Lig1P37913 Gm18644-201ENSMUST00000211458 815 ntBASIC4.8□□□□□ -1.64
Lig1P37913 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.8□□□□□ -1.64
Lig1P37913 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lig1P37913 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.8□□□□□ -1.64
Lig1P37913 AC154532.2-201ENSMUST00000228947 598 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Lig1P37913 Gm25592-201ENSMUST00000082635 131 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Lig1P37913 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Lig1P37913 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lig1P37913 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Lig1P37913 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.8□□□□□ -1.64
Lig1P37913 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lig1P37913 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lig1P37913 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Lig1P37913 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Lig1P37913 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lig1P37913 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lig1P37913 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lig1P37913 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lig1P37913 Gm26075-201ENSMUST00000104062 121 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm23226-201ENSMUST00000116927 103 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm14358-201ENSMUST00000118458 403 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm14835-201ENSMUST00000119039 315 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm13785-201ENSMUST00000119099 690 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm11321-201ENSMUST00000121257 902 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.79□□□□□ -1.64
Lig1P37913 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lig1P37913 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lig1P37913 Gm22236-201ENSMUST00000157093 106 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm25058-201ENSMUST00000157365 128 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm22314-201ENSMUST00000158007 281 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm15946-201ENSMUST00000160654 423 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm25999-201ENSMUST00000175398 133 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm25451-201ENSMUST00000177832 121 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm22166-201ENSMUST00000178419 121 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm23288-201ENSMUST00000179213 121 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm23816-201ENSMUST00000179617 132 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Mir496b-201ENSMUST00000184935 113 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.79□□□□□ -1.64
Lig1P37913 Gm29389-201ENSMUST00000191562 352 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.79□□□□□ -1.64
Lig1P37913 Gm38008-201ENSMUST00000195333 518 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm43856-201ENSMUST00000197004 369 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Trav15d-3-201ENSMUST00000198604 167 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm43892-201ENSMUST00000204373 265 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm45366-201ENSMUST00000209828 384 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm45539-201ENSMUST00000210313 428 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.79□□□□□ -1.64
Lig1P37913 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.79□□□□□ -1.64
Lig1P37913 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.79□□□□□ -1.64
Lig1P37913 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.79□□□□□ -1.64
Lig1P37913 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.79□□□□□ -1.64
Lig1P37913 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.79□□□□□ -1.64
Lig1P37913 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lig1P37913 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lig1P37913 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lig1P37913 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
Lig1P37913 Gm23510-201ENSMUST00000083083 163 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm24446-201ENSMUST00000083982 156 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Lig1P37913 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Lig1P37913 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lig1P37913 Gm14404-201ENSMUST00000119117 1660 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lig1P37913 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.79□□□□□ -1.64
Lig1P37913 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lig1P37913 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.79□□□□□ -1.64
Lig1P37913 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lig1P37913 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lig1P37913 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lig1P37913 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lig1P37913 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lig1P37913 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lig1P37913 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lig1P37913 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
Lig1P37913 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Lig1P37913 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lig1P37913 Gm11488-201ENSMUST00000117277 863 ntBASIC4.78□□□□□ -1.64
Lig1P37913 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lig1P37913 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.78□□□□□ -1.64
Lig1P37913 Gm11522-201ENSMUST00000120533 176 ntBASIC4.78□□□□□ -1.64
Lig1P37913 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.78□□□□□ -1.64
Lig1P37913 Gm5379-201ENSMUST00000120973 826 ntBASIC4.78□□□□□ -1.64
Lig1P37913 Gm22501-201ENSMUST00000158981 127 ntBASIC4.78□□□□□ -1.64
Lig1P37913 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.78□□□□□ -1.64
Lig1P37913 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.78□□□□□ -1.64
Lig1P37913 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.78□□□□□ -1.64
Lig1P37913 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.78□□□□□ -1.64
Lig1P37913 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms