Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.15□□□□□ -1.75
RxraP28700 Gm23167-201ENSMUST00000157155 103 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm25908-201ENSMUST00000157624 98 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
RxraP28700 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.15□□□□□ -1.75
RxraP28700 Gm27190-201ENSMUST00000184890 542 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm27286-201ENSMUST00000184934 179 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm18900-201ENSMUST00000193218 584 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm37670-201ENSMUST00000193622 229 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm37845-201ENSMUST00000194977 355 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm43245-201ENSMUST00000197603 468 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm35702-201ENSMUST00000198653 511 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.15□□□□□ -1.75
RxraP28700 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RxraP28700 Gm44032-201ENSMUST00000204841 166 ntBASIC4.15□□□□□ -1.75
RxraP28700 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm5338-201ENSMUST00000209530 639 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.15□□□□□ -1.75
RxraP28700 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.15□□□□□ -1.75
RxraP28700 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.15□□□□□ -1.75
RxraP28700 AC167977.1-201ENSMUST00000221384 234 ntBASIC4.15□□□□□ -1.75
RxraP28700 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm46369-201ENSMUST00000221577 401 ntBASIC4.15□□□□□ -1.75
RxraP28700 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.15□□□□□ -1.75
RxraP28700 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RxraP28700 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.15□□□□□ -1.75
RxraP28700 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RxraP28700 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.15□□□□□ -1.75
RxraP28700 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.15□□□□□ -1.75
RxraP28700 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RxraP28700 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.15□□□□□ -1.75
RxraP28700 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RxraP28700 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RxraP28700 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.15□□□□□ -1.75
RxraP28700 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
RxraP28700 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
RxraP28700 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.15□□□□□ -1.75
RxraP28700 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RxraP28700 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RxraP28700 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.14□□□□□ -1.75
RxraP28700 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.14□□□□□ -1.75
RxraP28700 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RxraP28700 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RxraP28700 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RxraP28700 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
RxraP28700 Gm24430-201ENSMUST00000104077 104 ntBASIC4.14□□□□□ -1.75
RxraP28700 Gm11219-201ENSMUST00000118565 358 ntBASIC4.14□□□□□ -1.75
RxraP28700 Gm13314-201ENSMUST00000118742 335 ntBASIC4.14□□□□□ -1.75
RxraP28700 Gm12891-201ENSMUST00000119358 240 ntBASIC4.14□□□□□ -1.75
RxraP28700 Gm14739-201ENSMUST00000120424 802 ntBASIC4.14□□□□□ -1.75
RxraP28700 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.14□□□□□ -1.75
RxraP28700 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.14□□□□□ -1.75
RxraP28700 Gm16303-201ENSMUST00000161498 390 ntBASIC4.14□□□□□ -1.75
RxraP28700 Gm23215-201ENSMUST00000178153 121 ntBASIC4.14□□□□□ -1.75
RxraP28700 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.14□□□□□ -1.75
RxraP28700 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC4.14□□□□□ -1.75
RxraP28700 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.14□□□□□ -1.75
RxraP28700 Gm27718-201ENSMUST00000183721 86 ntBASIC4.14□□□□□ -1.75
RxraP28700 Gm19503-201ENSMUST00000187109 241 ntBASIC4.14□□□□□ -1.75
RxraP28700 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.14□□□□□ -1.75
RxraP28700 Gm28802-201ENSMUST00000188624 944 ntBASIC4.14□□□□□ -1.75
RxraP28700 Gm29600-201ENSMUST00000188687 377 ntBASIC4.14□□□□□ -1.75
RxraP28700 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RxraP28700 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RxraP28700 Gm17838-201ENSMUST00000205872 876 ntBASIC4.14□□□□□ -1.75
RxraP28700 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.14□□□□□ -1.75
RxraP28700 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.14□□□□□ -1.75
RxraP28700 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.14□□□□□ -1.75
RxraP28700 AC192334.2-201ENSMUST00000223087 1091 ntBASIC4.14□□□□□ -1.75
RxraP28700 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RxraP28700 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RxraP28700 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.14□□□□□ -1.75
RxraP28700 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RxraP28700 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RxraP28700 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RxraP28700 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RxraP28700 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
RxraP28700 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RxraP28700 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RxraP28700 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RxraP28700 Gm25563-201ENSMUST00000104603 74 ntBASIC4.13□□□□□ -1.75
RxraP28700 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RxraP28700 Gm6923-201ENSMUST00000118343 406 ntBASIC4.13□□□□□ -1.75
RxraP28700 Gm14008-201ENSMUST00000120483 274 ntBASIC4.13□□□□□ -1.75
RxraP28700 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC4.13□□□□□ -1.75
RxraP28700 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC4.13□□□□□ -1.75
RxraP28700 Gm11891-201ENSMUST00000121241 619 ntBASIC4.13□□□□□ -1.75
RxraP28700 Gm23789-201ENSMUST00000122536 301 ntBASIC4.13□□□□□ -1.75
RxraP28700 Gm22453-201ENSMUST00000122801 318 ntBASIC4.13□□□□□ -1.75
RxraP28700 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RxraP28700 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RxraP28700 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RxraP28700 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RxraP28700 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RxraP28700 Gm24910-201ENSMUST00000157289 272 ntBASIC4.13□□□□□ -1.75
RxraP28700 Gm25058-201ENSMUST00000157365 128 ntBASIC4.13□□□□□ -1.75
RxraP28700 Gm25666-201ENSMUST00000157702 107 ntBASIC4.13□□□□□ -1.75
RxraP28700 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.13□□□□□ -1.75
RxraP28700 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms