Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.09□□□□□ -1.91
P20040 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.09□□□□□ -1.91
P20040 Gm46194-201ENSMUST00000218136 320 ntBASIC3.09□□□□□ -1.91
P20040 AC153522.1-201ENSMUST00000220047 1090 ntBASIC3.09□□□□□ -1.91
P20040 LOC667541-201ENSMUST00000223408 278 ntBASIC3.09□□□□□ -1.91
P20040 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.09□□□□□ -1.91
P20040 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.09□□□□□ -1.91
P20040 Gm9818-201ENSMUST00000050900 255 ntBASIC3.09□□□□□ -1.91
P20040 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
P20040 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
P20040 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
P20040 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
P20040 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
P20040 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
P20040 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.08□□□□□ -1.92
P20040 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
P20040 Gm24096-201ENSMUST00000103905 110 ntBASIC3.08□□□□□ -1.92
P20040 Gm12509-201ENSMUST00000118033 609 ntBASIC3.08□□□□□ -1.92
P20040 Gm14975-201ENSMUST00000118741 664 ntBASIC3.08□□□□□ -1.92
P20040 Gm13678-201ENSMUST00000118926 340 ntBASIC3.08□□□□□ -1.92
P20040 Gm14119-201ENSMUST00000119511 235 ntBASIC3.08□□□□□ -1.92
P20040 Gm16017-201ENSMUST00000119834 208 ntBASIC3.08□□□□□ -1.92
P20040 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.08□□□□□ -1.92
P20040 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
P20040 Gm28010-201ENSMUST00000179485 126 ntBASIC3.08□□□□□ -1.92
P20040 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
P20040 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.08□□□□□ -1.92
P20040 Gm18645-201ENSMUST00000209593 651 ntBASIC3.08□□□□□ -1.92
P20040 Gm35262-201ENSMUST00000215133 267 ntBASIC3.08□□□□□ -1.92
P20040 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.08□□□□□ -1.92
P20040 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.08□□□□□ -1.92
P20040 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
P20040 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
P20040 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
P20040 Gm22575-201ENSMUST00000082981 110 ntBASIC3.08□□□□□ -1.92
P20040 Gm22864-201ENSMUST00000083950 130 ntBASIC3.08□□□□□ -1.92
P20040 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
P20040 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.08□□□□□ -1.92
P20040 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
P20040 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.08□□□□□ -1.92
P20040 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.08□□□□□ -1.92
P20040 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
P20040 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
P20040 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
P20040 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.07□□□□□ -1.92
P20040 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
P20040 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
P20040 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
P20040 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
P20040 Gm24581-201ENSMUST00000103962 133 ntBASIC3.07□□□□□ -1.92
P20040 Gm25727-201ENSMUST00000104522 131 ntBASIC3.07□□□□□ -1.92
P20040 Gm15159-201ENSMUST00000117062 764 ntBASIC3.07□□□□□ -1.92
P20040 Gm11367-201ENSMUST00000117802 120 ntBASIC3.07□□□□□ -1.92
P20040 Gm14517-201ENSMUST00000119040 337 ntBASIC3.07□□□□□ -1.92
P20040 Gm12739-201ENSMUST00000119769 382 ntBASIC3.07□□□□□ -1.92
P20040 Gm12543-201ENSMUST00000120410 543 ntBASIC3.07□□□□□ -1.92
P20040 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.07□□□□□ -1.92
P20040 Gm15244-201ENSMUST00000121122 130 ntBASIC3.07□□□□□ -1.92
P20040 Gm14810-201ENSMUST00000121628 486 ntBASIC3.07□□□□□ -1.92
P20040 Gm13471-201ENSMUST00000122057 433 ntBASIC3.07□□□□□ -1.92
P20040 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.07□□□□□ -1.92
P20040 Gm25967-201ENSMUST00000157168 147 ntBASIC3.07□□□□□ -1.92
P20040 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
P20040 Mir5127-201ENSMUST00000175295 71 ntBASIC3.07□□□□□ -1.92
P20040 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.07□□□□□ -1.92
P20040 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
P20040 Gm7909-201ENSMUST00000182688 614 ntBASIC3.07□□□□□ -1.92
P20040 Gm27535-201ENSMUST00000183814 157 ntBASIC3.07□□□□□ -1.92
P20040 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
P20040 Gm20162-201ENSMUST00000193629 871 ntBASIC3.07□□□□□ -1.92
P20040 Gm19620-201ENSMUST00000195972 434 ntBASIC3.07□□□□□ -1.92
P20040 Gm9379-201ENSMUST00000196790 646 ntBASIC3.07□□□□□ -1.92
P20040 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.07□□□□□ -1.92
P20040 Gm18660-201ENSMUST00000199542 629 ntBASIC3.07□□□□□ -1.92
P20040 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.07□□□□□ -1.92
P20040 Gm44355-201ENSMUST00000200417 104 ntBASIC3.07□□□□□ -1.92
P20040 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
P20040 Gm45245-201ENSMUST00000210082 376 ntBASIC3.07□□□□□ -1.92
P20040 Gm45316-201ENSMUST00000210128 162 ntBASIC3.07□□□□□ -1.92
P20040 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
P20040 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
P20040 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
P20040 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.07□□□□□ -1.92
P20040 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
P20040 Gm23736-201ENSMUST00000082553 75 ntBASIC3.07□□□□□ -1.92
P20040 Gm26437-201ENSMUST00000082595 105 ntBASIC3.07□□□□□ -1.92
P20040 Gm22293-201ENSMUST00000083314 109 ntBASIC3.07□□□□□ -1.92
P20040 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
P20040 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
P20040 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
P20040 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.07□□□□□ -1.92
P20040 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.07□□□□□ -1.92
P20040 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
P20040 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
P20040 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
P20040 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
P20040 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
P20040 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
P20040 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
P20040 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms