Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm27510-201ENSMUST00000158214 64 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm24767-201ENSMUST00000158509 95 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm26022-201ENSMUST00000158663 108 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm17052-201ENSMUST00000165496 289 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm8214-201ENSMUST00000172123 351 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Msx1P13297 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm27233-201ENSMUST00000184030 307 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm27608-201ENSMUST00000184822 162 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm7329-201ENSMUST00000185915 210 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm5329-201ENSMUST00000186898 463 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm28453-203ENSMUST00000187041 189 ntBASIC5.48□□□□□ -1.53
Msx1P13297 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Mir6994-201ENSMUST00000198985 73 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm25203-202ENSMUST00000200458 216 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm5002-201ENSMUST00000207145 223 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm45070-201ENSMUST00000208100 246 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm9685-201ENSMUST00000211275 538 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm39197-201ENSMUST00000212069 457 ntBASIC5.48□□□□□ -1.53
Msx1P13297 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm11360-201ENSMUST00000221898 262 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm23625-201ENSMUST00000082457 100 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm25203-201ENSMUST00000082842 215 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm24200-201ENSMUST00000082955 157 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Gm24029-201ENSMUST00000083928 143 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Msx1P13297 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msx1P13297 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msx1P13297 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Msx1P13297 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.48□□□□□ -1.53
Msx1P13297 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Msx1P13297 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Msx1P13297 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.48□□□□□ -1.53
Msx1P13297 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Msx1P13297 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Msx1P13297 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Msx1P13297 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Msx1P13297 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msx1P13297 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Msx1P13297 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Msx1P13297 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Msx1P13297 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.47□□□□□ -1.53
Msx1P13297 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.47□□□□□ -1.53
Msx1P13297 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Msx1P13297 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 Gm14803-201ENSMUST00000117163 361 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Gm12820-201ENSMUST00000119233 342 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Gm14581-201ENSMUST00000121726 198 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 Gm22537-201ENSMUST00000158172 199 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Gm22113-201ENSMUST00000158343 104 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Gm3370-201ENSMUST00000171785 500 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.47□□□□□ -1.53
Msx1P13297 Gm22420-201ENSMUST00000178795 126 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Gm28017-201ENSMUST00000183434 126 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.47□□□□□ -1.53
Msx1P13297 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.47□□□□□ -1.53
Msx1P13297 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.47□□□□□ -1.53
Msx1P13297 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.47□□□□□ -1.53
Msx1P13297 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.47□□□□□ -1.53
Msx1P13297 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.47□□□□□ -1.53
Msx1P13297 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.47□□□□□ -1.53
Msx1P13297 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.47□□□□□ -1.53
Msx1P13297 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC5.47□□□□□ -1.53
Msx1P13297 Gm43712-201ENSMUST00000198020 291 ntBASIC5.47□□□□□ -1.53
Msx1P13297 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Msx1P13297 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC5.47□□□□□ -1.53
Msx1P13297 Gm2011-203ENSMUST00000203750 435 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.47□□□□□ -1.53
Msx1P13297 AC154282.1-201ENSMUST00000223154 265 ntBASIC5.47□□□□□ -1.53
Msx1P13297 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Gm26055-201ENSMUST00000083038 107 ntBASIC5.47□□□□□ -1.53
Msx1P13297 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.47□□□□□ -1.53
Msx1P13297 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Msx1P13297 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Msx1P13297 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
Msx1P13297 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.46□□□□□ -1.53
Msx1P13297 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Msx1P13297 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Msx1P13297 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms