Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RaraP11416 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RaraP11416 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RaraP11416 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
RaraP11416 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RaraP11416 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.41□□□□□ -1.54
RaraP11416 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RaraP11416 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.4□□□□□ -1.54
RaraP11416 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RaraP11416 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RaraP11416 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.4□□□□□ -1.54
RaraP11416 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RaraP11416 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.4□□□□□ -1.54
RaraP11416 Gm13122-201ENSMUST00000118380 453 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm15012-201ENSMUST00000119176 106 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm12852-201ENSMUST00000119478 719 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm14287-201ENSMUST00000121060 117 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm24546-201ENSMUST00000158652 102 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC5.4□□□□□ -1.54
RaraP11416 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RaraP11416 Gm9830-201ENSMUST00000178509 357 ntBASIC5.4□□□□□ -1.54
RaraP11416 Mir6926-201ENSMUST00000184562 68 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm18728-201ENSMUST00000186155 753 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm28399-201ENSMUST00000186221 318 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm28572-201ENSMUST00000187444 318 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm29365-201ENSMUST00000189461 699 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.4□□□□□ -1.54
RaraP11416 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.4□□□□□ -1.54
RaraP11416 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.4□□□□□ -1.54
RaraP11416 AC124346.1-201ENSMUST00000218539 364 ntBASIC5.4□□□□□ -1.54
RaraP11416 AC167229.1-201ENSMUST00000220057 469 ntBASIC5.4□□□□□ -1.54
RaraP11416 CT009718.4-201ENSMUST00000221881 109 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm6474-201ENSMUST00000223250 699 ntBASIC5.4□□□□□ -1.54
RaraP11416 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm2710-201ENSMUST00000073196 603 ntBASIC5.4□□□□□ -1.54
RaraP11416 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RaraP11416 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RaraP11416 Gm9386-201ENSMUST00000095195 381 ntBASIC5.4□□□□□ -1.54
RaraP11416 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.4□□□□□ -1.55
RaraP11416 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RaraP11416 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.4□□□□□ -1.55
RaraP11416 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.4□□□□□ -1.55
RaraP11416 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RaraP11416 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RaraP11416 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
RaraP11416 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RaraP11416 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.55
RaraP11416 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RaraP11416 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.4□□□□□ -1.55
RaraP11416 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RaraP11416 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RaraP11416 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RaraP11416 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RaraP11416 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RaraP11416 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
RaraP11416 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RaraP11416 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RaraP11416 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RaraP11416 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RaraP11416 Gm23750-201ENSMUST00000104222 132 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RaraP11416 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RaraP11416 Gm13250-201ENSMUST00000117209 753 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm11912-201ENSMUST00000117235 264 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm8595-201ENSMUST00000118250 630 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm14619-201ENSMUST00000120480 168 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm22718-201ENSMUST00000122701 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm25290-201ENSMUST00000122796 144 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC5.39□□□□□ -1.55
RaraP11416 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC5.39□□□□□ -1.55
RaraP11416 Mir1963-201ENSMUST00000158594 59 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm17109-201ENSMUST00000163985 358 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm3027-201ENSMUST00000167579 451 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm3104-201ENSMUST00000171004 473 ntBASIC5.39□□□□□ -1.55
RaraP11416 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29512-201ENSMUST00000185544 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28110-201ENSMUST00000185782 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm19637-201ENSMUST00000185933 579 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28943-201ENSMUST00000186187 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28736-201ENSMUST00000186257 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28838-201ENSMUST00000186338 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29057-201ENSMUST00000186468 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm21673-201ENSMUST00000186640 436 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29401-201ENSMUST00000186690 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29661-201ENSMUST00000186781 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29178-204ENSMUST00000186784 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28737-201ENSMUST00000186808 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29118-201ENSMUST00000186908 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28589-201ENSMUST00000186991 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28433-201ENSMUST00000187085 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28163-201ENSMUST00000187099 325 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28936-201ENSMUST00000187153 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29635-201ENSMUST00000187221 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29121-201ENSMUST00000187611 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28759-201ENSMUST00000187621 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28831-201ENSMUST00000187739 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28200-201ENSMUST00000187778 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29026-201ENSMUST00000187787 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28243-201ENSMUST00000187801 615 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms