Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
Lire1P11260 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Lire1P11260 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Lire1P11260 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm24788-201ENSMUST00000104283 156 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm14125-201ENSMUST00000113442 680 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm15282-201ENSMUST00000117707 300 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm11398-201ENSMUST00000120330 320 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm7308-201ENSMUST00000121087 447 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm14463-201ENSMUST00000121117 498 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm12881-201ENSMUST00000121191 203 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm12755-201ENSMUST00000122297 282 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm22453-201ENSMUST00000122801 318 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm24720-201ENSMUST00000157518 166 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm16569-201ENSMUST00000160526 314 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.77□□□□□ -1.81
Lire1P11260 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.77□□□□□ -1.81
Lire1P11260 Gm17186-201ENSMUST00000171742 456 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm23215-201ENSMUST00000178153 121 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Lire1P11260 Gm27964-201ENSMUST00000185195 62 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm38201-201ENSMUST00000192143 387 ntBASIC3.77□□□□□ -1.81
Lire1P11260 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Lire1P11260 Gm18660-201ENSMUST00000199542 629 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Gm43659-201ENSMUST00000200894 628 ntBASIC3.77□□□□□ -1.81
Lire1P11260 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Lire1P11260 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.77□□□□□ -1.81
Lire1P11260 Gm45023-201ENSMUST00000207951 379 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Lire1P11260 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Lire1P11260 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
Lire1P11260 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.77□□□□□ -1.81
Lire1P11260 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Lire1P11260 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Lire1P11260 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Lire1P11260 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.76□□□□□ -1.81
Lire1P11260 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Lire1P11260 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Lire1P11260 Gm7648-201ENSMUST00000173036 1658 ntBASIC3.76□□□□□ -1.81
Lire1P11260 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Lire1P11260 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.76□□□□□ -1.81
Lire1P11260 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.76□□□□□ -1.81
Lire1P11260 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Lire1P11260 Gm15364-201ENSMUST00000119618 585 ntBASIC3.76□□□□□ -1.81
Lire1P11260 Gm15142-201ENSMUST00000121013 856 ntBASIC3.76□□□□□ -1.81
Lire1P11260 Gm22986-201ENSMUST00000122753 130 ntBASIC3.76□□□□□ -1.81
Lire1P11260 Gm22988-201ENSMUST00000122759 144 ntBASIC3.76□□□□□ -1.81
Lire1P11260 Gm22314-201ENSMUST00000158007 281 ntBASIC3.76□□□□□ -1.81
Lire1P11260 Gm20612-201ENSMUST00000176318 236 ntBASIC3.76□□□□□ -1.81
Lire1P11260 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.76□□□□□ -1.81
Lire1P11260 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.76□□□□□ -1.81
Lire1P11260 Mir129b-201ENSMUST00000197461 65 ntBASIC3.76□□□□□ -1.81
Lire1P11260 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.76□□□□□ -1.81
Lire1P11260 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Lire1P11260 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.76□□□□□ -1.81
Lire1P11260 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.76□□□□□ -1.81
Lire1P11260 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.76□□□□□ -1.81
Lire1P11260 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.76□□□□□ -1.81
Lire1P11260 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.76□□□□□ -1.81
Lire1P11260 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.76□□□□□ -1.81
Lire1P11260 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.76□□□□□ -1.81
Lire1P11260 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.76□□□□□ -1.81
Lire1P11260 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Lire1P11260 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
Lire1P11260 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Lire1P11260 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Lire1P11260 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Lire1P11260 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
Lire1P11260 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Lire1P11260 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Lire1P11260 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Lire1P11260 Gm25313-201ENSMUST00000101817 116 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm23319-201ENSMUST00000104467 131 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Lire1P11260 Gm2348-201ENSMUST00000108782 300 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm13567-201ENSMUST00000118026 247 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm13087-201ENSMUST00000118298 256 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm13082-201ENSMUST00000118877 561 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm9001-201ENSMUST00000121642 399 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm12103-201ENSMUST00000121892 362 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.75□□□□□ -1.81
Lire1P11260 Gm26320-201ENSMUST00000157742 306 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm24850-201ENSMUST00000158029 119 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Mir3112-201ENSMUST00000175431 82 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm25748-201ENSMUST00000175487 70 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm23287-201ENSMUST00000179427 116 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm23143-201ENSMUST00000180137 116 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm10292-201ENSMUST00000183142 581 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm28146-201ENSMUST00000185517 701 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm37281-201ENSMUST00000192412 439 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm42566-201ENSMUST00000197120 643 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Gm21089-201ENSMUST00000215843 325 ntBASIC3.75□□□□□ -1.81
Lire1P11260 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.75□□□□□ -1.81
Lire1P11260 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms