Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.54□□□□□ -1.84
Chmp6P0C0A3 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.54□□□□□ -1.84
Chmp6P0C0A3 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.54□□□□□ -1.84
Chmp6P0C0A3 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.54□□□□□ -1.84
Chmp6P0C0A3 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.54□□□□□ -1.84
Chmp6P0C0A3 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.54□□□□□ -1.84
Chmp6P0C0A3 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Chmp6P0C0A3 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Chmp6P0C0A3 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Chmp6P0C0A3 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Chmp6P0C0A3 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Chmp6P0C0A3 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Chmp6P0C0A3 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Chmp6P0C0A3 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Chmp6P0C0A3 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Mir673-201ENSMUST00000102361 91 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm24096-201ENSMUST00000103905 110 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm12739-201ENSMUST00000119769 382 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm15244-201ENSMUST00000121122 130 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm13511-201ENSMUST00000121167 363 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm14581-201ENSMUST00000121726 198 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm28552-201ENSMUST00000190725 388 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm29011-201ENSMUST00000191059 712 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm6510-201ENSMUST00000195916 574 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm23460-201ENSMUST00000083258 109 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Chmp6P0C0A3 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.53□□□□□ -1.85
Chmp6P0C0A3 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm24403-201ENSMUST00000104616 130 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm6429-201ENSMUST00000117144 475 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm13273-201ENSMUST00000119737 159 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm11876-201ENSMUST00000120002 269 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm14534-201ENSMUST00000120045 357 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm26020-201ENSMUST00000122729 183 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm26487-201ENSMUST00000158022 94 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm25555-201ENSMUST00000158078 111 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm26005-201ENSMUST00000158802 134 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm9587-201ENSMUST00000172449 454 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm5175-202ENSMUST00000219699 529 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm9765-201ENSMUST00000043170 321 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Chmp6P0C0A3 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Mir1193-201ENSMUST00000116761 121 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm13379-201ENSMUST00000118053 621 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm12515-201ENSMUST00000120116 361 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm7350-201ENSMUST00000120964 636 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm15142-201ENSMUST00000121013 856 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms