Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd3P09027 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Hoxd3P09027 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd3P09027 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd3P09027 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Hoxd3P09027 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Hoxd3P09027 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 AC121942.1-201ENSMUST00000224459 2891 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm43210-201ENSMUST00000196743 6152 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm44043-201ENSMUST00000203426 3253 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm44440-201ENSMUST00000203139 2373 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm22784-201ENSMUST00000104088 132 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm25938-201ENSMUST00000104139 166 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm12112-201ENSMUST00000117772 231 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm13457-201ENSMUST00000117885 267 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm11572-201ENSMUST00000119164 120 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm15244-201ENSMUST00000121122 130 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm12488-201ENSMUST00000122449 499 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm23232-201ENSMUST00000157300 105 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm25599-201ENSMUST00000157816 103 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm22113-201ENSMUST00000158343 104 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm20534-201ENSMUST00000172957 172 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Mir3572-201ENSMUST00000175549 86 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Mir7235-201ENSMUST00000183796 56 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm8419-201ENSMUST00000189886 412 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm28978-201ENSMUST00000191120 615 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm36189-201ENSMUST00000204113 523 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm3816-201ENSMUST00000209803 433 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm6009-201ENSMUST00000210848 280 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm9685-201ENSMUST00000211275 538 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm18188-201ENSMUST00000219386 478 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Hoxd3P09027 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm23041-201ENSMUST00000083868 106 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 n-R5s69-201ENSMUST00000083872 119 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Gm7381-201ENSMUST00000098958 300 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.53□□□□□ -1.68
Hoxd3P09027 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Hoxd3P09027 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Hoxd3P09027 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hoxd3P09027 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hoxd3P09027 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hoxd3P09027 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC4.52□□□□□ -1.69
Hoxd3P09027 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Hoxd3P09027 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Hoxd3P09027 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hoxd3P09027 AC130827.1-201ENSMUST00000220476 3850 ntBASIC4.52□□□□□ -1.69
Hoxd3P09027 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Hoxd3P09027 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Hoxd3P09027 Gm6884-201ENSMUST00000119318 615 ntBASIC4.52□□□□□ -1.69
Hoxd3P09027 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.52□□□□□ -1.69
Hoxd3P09027 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC4.52□□□□□ -1.69
Hoxd3P09027 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hoxd3P09027 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hoxd3P09027 Gm6081-201ENSMUST00000134472 489 ntBASIC4.52□□□□□ -1.69
Hoxd3P09027 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.52□□□□□ -1.69
Hoxd3P09027 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.52□□□□□ -1.69
Hoxd3P09027 Gm23280-201ENSMUST00000157905 139 ntBASIC4.52□□□□□ -1.69
Hoxd3P09027 Gm23312-201ENSMUST00000158774 102 ntBASIC4.52□□□□□ -1.69
Hoxd3P09027 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.52□□□□□ -1.69
Hoxd3P09027 Gm3053-201ENSMUST00000161709 616 ntBASIC4.52□□□□□ -1.69
Hoxd3P09027 Mir7685-201ENSMUST00000183555 62 ntBASIC4.52□□□□□ -1.69
Hoxd3P09027 Gm27608-201ENSMUST00000184822 162 ntBASIC4.52□□□□□ -1.69
Hoxd3P09027 Gm37235-201ENSMUST00000195171 59 ntBASIC4.52□□□□□ -1.69
Hoxd3P09027 Gm6543-201ENSMUST00000197353 808 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms