Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm27568-201ENSMUST00000184220 99 ntBASIC4.49□□□□□ -1.69
Best1O88870 Gm8392-201ENSMUST00000185647 835 ntBASIC4.49□□□□□ -1.69
Best1O88870 Gm37670-201ENSMUST00000193622 229 ntBASIC4.49□□□□□ -1.69
Best1O88870 Gm42663-201ENSMUST00000199883 351 ntBASIC4.49□□□□□ -1.69
Best1O88870 Gm43028-201ENSMUST00000202561 481 ntBASIC4.49□□□□□ -1.69
Best1O88870 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.49□□□□□ -1.69
Best1O88870 Gm45232-201ENSMUST00000207811 162 ntBASIC4.49□□□□□ -1.69
Best1O88870 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Best1O88870 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.49□□□□□ -1.69
Best1O88870 CT010480.5-201ENSMUST00000225026 217 ntBASIC4.49□□□□□ -1.69
Best1O88870 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.49□□□□□ -1.69
Best1O88870 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Best1O88870 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Best1O88870 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Best1O88870 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Best1O88870 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.49□□□□□ -1.69
Best1O88870 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Best1O88870 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Best1O88870 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Best1O88870 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Best1O88870 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.48□□□□□ -1.69
Best1O88870 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Best1O88870 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Best1O88870 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Best1O88870 Gm14751-201ENSMUST00000117693 222 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm14594-201ENSMUST00000118052 537 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm14359-201ENSMUST00000118883 424 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm14590-201ENSMUST00000118934 537 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm14784-201ENSMUST00000121604 663 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm12103-201ENSMUST00000121892 362 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm15038-201ENSMUST00000122144 296 ntBASIC4.48□□□□□ -1.69
Best1O88870 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.48□□□□□ -1.69
Best1O88870 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Best1O88870 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Best1O88870 Gm9498-201ENSMUST00000140849 291 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.48□□□□□ -1.69
Best1O88870 Gm20701-201ENSMUST00000176082 347 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm14596-201ENSMUST00000180268 537 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm14595-201ENSMUST00000180335 537 ntBASIC4.48□□□□□ -1.69
Best1O88870 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm27875-201ENSMUST00000184425 123 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm27564-201ENSMUST00000185196 96 ntBASIC4.48□□□□□ -1.69
Best1O88870 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Best1O88870 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.48□□□□□ -1.69
Best1O88870 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.48□□□□□ -1.69
Best1O88870 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm9238-201ENSMUST00000196181 329 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm8069-201ENSMUST00000197887 154 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm44485-201ENSMUST00000199569 137 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm17956-201ENSMUST00000199931 838 ntBASIC4.48□□□□□ -1.69
Best1O88870 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.48□□□□□ -1.69
Best1O88870 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.48□□□□□ -1.69
Best1O88870 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm3338-201ENSMUST00000220982 269 ntBASIC4.48□□□□□ -1.69
Best1O88870 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Best1O88870 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Best1O88870 Gm25147-201ENSMUST00000083030 105 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm25859-201ENSMUST00000083710 91 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm23848-201ENSMUST00000083826 106 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm23503-201ENSMUST00000083903 107 ntBASIC4.48□□□□□ -1.69
Best1O88870 Gm25821-201ENSMUST00000093657 133 ntBASIC4.48□□□□□ -1.69
Best1O88870 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Best1O88870 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Best1O88870 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Best1O88870 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Best1O88870 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Best1O88870 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Best1O88870 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Best1O88870 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Best1O88870 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Best1O88870 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Best1O88870 Gm23948-201ENSMUST00000104030 132 ntBASIC4.47□□□□□ -1.69
Best1O88870 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.47□□□□□ -1.69
Best1O88870 Gm13046-201ENSMUST00000117391 501 ntBASIC4.47□□□□□ -1.69
Best1O88870 Gm14878-201ENSMUST00000118167 293 ntBASIC4.47□□□□□ -1.69
Best1O88870 Gm8129-201ENSMUST00000118230 213 ntBASIC4.47□□□□□ -1.69
Best1O88870 Gm12368-201ENSMUST00000122251 434 ntBASIC4.47□□□□□ -1.69
Best1O88870 Gm22199-201ENSMUST00000122660 126 ntBASIC4.47□□□□□ -1.69
Best1O88870 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Best1O88870 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Best1O88870 Gm17538-201ENSMUST00000168236 327 ntBASIC4.47□□□□□ -1.69
Best1O88870 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Best1O88870 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.47□□□□□ -1.69
Best1O88870 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.47□□□□□ -1.69
Best1O88870 Gm37757-201ENSMUST00000193072 210 ntBASIC4.47□□□□□ -1.69
Best1O88870 Gm37836-201ENSMUST00000195875 175 ntBASIC4.47□□□□□ -1.69
Best1O88870 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.47□□□□□ -1.69
Best1O88870 Gm42665-201ENSMUST00000202100 586 ntBASIC4.47□□□□□ -1.69
Best1O88870 Gm44054-201ENSMUST00000203814 372 ntBASIC4.47□□□□□ -1.69
Best1O88870 Gm44208-201ENSMUST00000205199 421 ntBASIC4.47□□□□□ -1.69
Best1O88870 Gm44779-201ENSMUST00000206937 708 ntBASIC4.47□□□□□ -1.69
Best1O88870 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.47□□□□□ -1.69
Best1O88870 Gm45327-201ENSMUST00000211612 565 ntBASIC4.47□□□□□ -1.69
Best1O88870 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.47□□□□□ -1.69
Best1O88870 Gm46193-201ENSMUST00000219399 364 ntBASIC4.47□□□□□ -1.69
Best1O88870 Gm17890-201ENSMUST00000221419 757 ntBASIC4.47□□□□□ -1.69
Best1O88870 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.47□□□□□ -1.69
Best1O88870 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Best1O88870 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Best1O88870 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 125.5 ms