Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.83□□□□□ -1.32
Clcn6O35454 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clcn6O35454 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Clcn6O35454 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC6.83□□□□□ -1.32
Clcn6O35454 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clcn6O35454 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Clcn6O35454 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clcn6O35454 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clcn6O35454 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clcn6O35454 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Clcn6O35454 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Clcn6O35454 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
Clcn6O35454 Gm37718-201ENSMUST00000191655 2631 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 Gm36969-201ENSMUST00000194551 2809 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.82□□□□□ -1.32
Clcn6O35454 Mir767-201ENSMUST00000103256 107 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 Gm25418-201ENSMUST00000104214 129 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 Gm13811-201ENSMUST00000117800 256 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 Gm14115-201ENSMUST00000119242 482 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 Gm5558-201ENSMUST00000178933 495 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 Mir7212-201ENSMUST00000184098 61 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.82□□□□□ -1.32
Clcn6O35454 Gm43116-201ENSMUST00000199789 195 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 AC091783.5-201ENSMUST00000224928 671 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC6.82□□□□□ -1.32
Clcn6O35454 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Clcn6O35454 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Clcn6O35454 Gm45093-201ENSMUST00000206859 2463 ntBASIC6.82□□□□□ -1.32
Clcn6O35454 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Clcn6O35454 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clcn6O35454 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clcn6O35454 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Clcn6O35454 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.81□□□□□ -1.32
Clcn6O35454 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.81□□□□□ -1.32
Clcn6O35454 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clcn6O35454 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clcn6O35454 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Clcn6O35454 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Clcn6O35454 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Clcn6O35454 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Clcn6O35454 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Clcn6O35454 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Clcn6O35454 Gm15129-201ENSMUST00000119673 279 ntBASIC6.81□□□□□ -1.32
Clcn6O35454 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Clcn6O35454 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.81□□□□□ -1.32
Clcn6O35454 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.81□□□□□ -1.32
Clcn6O35454 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Clcn6O35454 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Clcn6O35454 Gm37848-201ENSMUST00000195288 3103 ntBASIC6.81□□□□□ -1.32
Clcn6O35454 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.81□□□□□ -1.32
Clcn6O35454 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Clcn6O35454 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.81□□□□□ -1.32
Clcn6O35454 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Clcn6O35454 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.81□□□□□ -1.32
Clcn6O35454 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.81□□□□□ -1.32
Clcn6O35454 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Clcn6O35454 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Clcn6O35454 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Clcn6O35454 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clcn6O35454 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Clcn6O35454 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Clcn6O35454 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Clcn6O35454 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Clcn6O35454 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clcn6O35454 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Clcn6O35454 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.8□□□□□ -1.32
Clcn6O35454 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clcn6O35454 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Clcn6O35454 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clcn6O35454 Gm22231-201ENSMUST00000101027 73 ntBASIC6.8□□□□□ -1.32
Clcn6O35454 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.8□□□□□ -1.32
Clcn6O35454 Gm22031-201ENSMUST00000116945 126 ntBASIC6.8□□□□□ -1.32
Clcn6O35454 Gm23888-201ENSMUST00000122690 253 ntBASIC6.8□□□□□ -1.32
Clcn6O35454 Gm26023-201ENSMUST00000122722 313 ntBASIC6.8□□□□□ -1.32
Clcn6O35454 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Clcn6O35454 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC6.8□□□□□ -1.32
Clcn6O35454 Gm24300-201ENSMUST00000177809 109 ntBASIC6.8□□□□□ -1.32
Clcn6O35454 Gm24017-201ENSMUST00000178726 109 ntBASIC6.8□□□□□ -1.32
Clcn6O35454 Gm23952-201ENSMUST00000179380 109 ntBASIC6.8□□□□□ -1.32
Clcn6O35454 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.8□□□□□ -1.32
Clcn6O35454 Igkv1-115-201ENSMUST00000198714 302 ntBASIC6.8□□□□□ -1.32
Clcn6O35454 Gm43141-201ENSMUST00000199695 274 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms