Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Bhlhe40O35185 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Bhlhe40O35185 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Bhlhe40O35185 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3□□□□□ -1.93
Bhlhe40O35185 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Bhlhe40O35185 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Bhlhe40O35185 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Bhlhe40O35185 Mir693-201ENSMUST00000102187 89 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3□□□□□ -1.93
Bhlhe40O35185 Gm25407-201ENSMUST00000104102 134 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Gm24671-201ENSMUST00000104159 158 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Gm4910-201ENSMUST00000119605 366 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Gm6461-201ENSMUST00000120015 633 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Gm14927-201ENSMUST00000120283 454 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Gm8988-201ENSMUST00000155015 1240 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Gm22036-201ENSMUST00000157279 215 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Gm16300-201ENSMUST00000160031 1279 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Gm17187-201ENSMUST00000164622 410 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3□□□□□ -1.93
Bhlhe40O35185 Gm27315-201ENSMUST00000183977 154 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Mir8096-201ENSMUST00000184526 127 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Gm6445-201ENSMUST00000189515 1112 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3□□□□□ -1.93
Bhlhe40O35185 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Gm43704-201ENSMUST00000196164 496 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3□□□□□ -1.93
Bhlhe40O35185 Gm45038-201ENSMUST00000207537 3838 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3□□□□□ -1.93
Bhlhe40O35185 Gm36247-201ENSMUST00000211834 285 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Bhlhe40O35185 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Bhlhe40O35185 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3□□□□□ -1.93
Bhlhe40O35185 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Bhlhe40O35185 Gm14387-201ENSMUST00000121827 2055 ntBASIC3□□□□□ -1.93
Bhlhe40O35185 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Bhlhe40O35185 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Bhlhe40O35185 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm24890-201ENSMUST00000104389 102 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Bhlhe40O35185 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm12156-201ENSMUST00000119188 554 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm11876-201ENSMUST00000120002 269 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm11965-201ENSMUST00000122017 277 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm6265-201ENSMUST00000149263 231 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm9613-201ENSMUST00000171662 196 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm7634-201ENSMUST00000185778 553 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm28282-201ENSMUST00000186072 186 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm18984-201ENSMUST00000193998 1124 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm45312-201ENSMUST00000210566 311 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Bhlhe40O35185 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Bhlhe40O35185 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Bhlhe40O35185 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Ube2nl-201ENSMUST00000085228 456 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Bhlhe40O35185 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Bhlhe40O35185 Gm43736-201ENSMUST00000196377 2281 ntBASIC2.99□□□□□ -1.93
Bhlhe40O35185 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Bhlhe40O35185 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm38090-201ENSMUST00000195733 1942 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Bhlhe40O35185 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm12448-201ENSMUST00000118852 655 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm16216-201ENSMUST00000118970 1111 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm23716-201ENSMUST00000157348 144 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm26088-201ENSMUST00000157896 131 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm22538-201ENSMUST00000158169 299 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm24213-201ENSMUST00000158255 258 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm4761-201ENSMUST00000178086 582 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm23402-201ENSMUST00000178130 107 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm19791-201ENSMUST00000180398 859 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm19280-201ENSMUST00000190191 205 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm37290-201ENSMUST00000195775 339 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm45063-201ENSMUST00000203726 472 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.98□□□□□ -1.93
Bhlhe40O35185 Gm30534-201ENSMUST00000217928 207 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 AC122924.1-201ENSMUST00000222044 163 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 AC154467.1-201ENSMUST00000227527 449 ntBASIC2.98□□□□□ -1.93
Bhlhe40O35185 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Bhlhe40O35185 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms