Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm23211-201ENSMUST00000122717 308 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm26086-201ENSMUST00000157902 263 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm22769-201ENSMUST00000158367 98 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm3191-201ENSMUST00000167139 346 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm21171-201ENSMUST00000180048 673 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm37889-201ENSMUST00000194174 251 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm38670-201ENSMUST00000199248 77 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm20039-201ENSMUST00000210329 394 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm45777-201ENSMUST00000213009 301 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.87□□□□□ -1.63
Trim55G3X8Y1 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm25475-201ENSMUST00000082825 180 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm24525-201ENSMUST00000082917 151 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm23645-201ENSMUST00000083228 108 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Trim55G3X8Y1 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm11550-201ENSMUST00000118210 699 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm13887-201ENSMUST00000119009 344 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm2389-201ENSMUST00000160487 189 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Mir3080-201ENSMUST00000175010 79 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm27528-201ENSMUST00000183544 205 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm33601-201ENSMUST00000210001 961 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm46194-201ENSMUST00000218136 320 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 CT025579.3-201ENSMUST00000224543 451 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm26228-201ENSMUST00000082512 107 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm25080-201ENSMUST00000082526 107 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm23404-201ENSMUST00000082543 97 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm23423-201ENSMUST00000082782 106 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm25518-201ENSMUST00000083864 107 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.86□□□□□ -1.63
Trim55G3X8Y1 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm22032-201ENSMUST00000116946 116 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm12787-201ENSMUST00000119234 396 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm9043-201ENSMUST00000119677 314 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm13537-201ENSMUST00000120467 267 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm15044-201ENSMUST00000120703 598 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm13932-201ENSMUST00000120873 610 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm11804-201ENSMUST00000121663 468 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm25781-201ENSMUST00000122527 84 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm23867-201ENSMUST00000122649 274 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm25389-201ENSMUST00000157340 286 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm25447-201ENSMUST00000158997 128 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm22122-201ENSMUST00000175147 200 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm24757-201ENSMUST00000176987 371 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm22633-201ENSMUST00000179834 107 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm28506-201ENSMUST00000189937 150 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm33354-201ENSMUST00000195448 906 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm18442-201ENSMUST00000220925 639 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Gm7768-201ENSMUST00000222988 597 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim55G3X8Y1 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms