Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm18120-201ENSMUST00000220079 511 ntBASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm5655-201ENSMUST00000221078 901 ntBASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm25420-201ENSMUST00000104216 127 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm26418-201ENSMUST00000104275 137 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm13650-201ENSMUST00000117729 433 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm11403-201ENSMUST00000122195 369 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm26276-201ENSMUST00000157099 109 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm7346-201ENSMUST00000169661 476 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm37343-201ENSMUST00000192542 111 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm44266-201ENSMUST00000205235 500 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm44634-201ENSMUST00000206119 152 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm45273-201ENSMUST00000211559 281 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm9628-201ENSMUST00000222169 725 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm25481-201ENSMUST00000083221 158 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm10704-201ENSMUST00000098952 730 ntBASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm11577-201ENSMUST00000118030 737 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm22059-201ENSMUST00000157544 104 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm24014-201ENSMUST00000157728 157 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm25436-201ENSMUST00000158275 145 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm22889-201ENSMUST00000158639 58 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm37495-201ENSMUST00000194590 264 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm37817-201ENSMUST00000195276 434 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm9632-201ENSMUST00000195934 643 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm42926-201ENSMUST00000200496 697 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm8745-201ENSMUST00000207846 782 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm45553-201ENSMUST00000209929 507 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm3829-201ENSMUST00000222362 619 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Mir30e-201ENSMUST00000083475 92 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.28□□□□□ -1.88
Pcdhgb8A0A140LI48 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Pcdhgb8A0A140LI48 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.27□□□□□ -1.89
Pcdhgb8A0A140LI48 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Pcdhgb8A0A140LI48 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.27□□□□□ -1.89
Pcdhgb8A0A140LI48 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Pcdhgb8A0A140LI48 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 144.8 ms