Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm23460-201ENSMUST00000083258 109 ntBASIC3.18□□□□□ -1.9
Trav1A0A075B5Z4 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav1A0A075B5Z4 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav1A0A075B5Z4 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav1A0A075B5Z4 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav1A0A075B5Z4 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav1A0A075B5Z4 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.18□□□□□ -1.9
Trav1A0A075B5Z4 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav1A0A075B5Z4 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.18□□□□□ -1.9
Trav1A0A075B5Z4 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.18□□□□□ -1.9
Trav1A0A075B5Z4 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav1A0A075B5Z4 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Mir208b-201ENSMUST00000104735 77 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm14811-201ENSMUST00000117070 117 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm11488-201ENSMUST00000117277 863 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm13731-201ENSMUST00000117332 196 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm15783-201ENSMUST00000117521 633 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm14655-201ENSMUST00000120124 578 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm23145-201ENSMUST00000178912 79 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Mir6401-201ENSMUST00000184499 109 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Mir6899-201ENSMUST00000184798 64 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm27538-201ENSMUST00000185065 294 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm28625-201ENSMUST00000188309 205 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm38234-201ENSMUST00000195204 421 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Mir5121-201ENSMUST00000198528 74 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm43142-201ENSMUST00000198670 361 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm42814-201ENSMUST00000199370 460 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm44355-201ENSMUST00000200417 104 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm43925-201ENSMUST00000203498 206 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm44583-201ENSMUST00000207478 281 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm45912-201ENSMUST00000210646 543 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm45690-201ENSMUST00000210775 246 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm7119-201ENSMUST00000221345 695 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm9628-201ENSMUST00000222169 725 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 AC154506.3-201ENSMUST00000225417 213 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm25630-201ENSMUST00000084000 162 ntBASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav1A0A075B5Z4 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm37588-201ENSMUST00000195024 2496 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm13603-201ENSMUST00000119404 83 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm12691-201ENSMUST00000120186 456 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm15142-201ENSMUST00000121013 856 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm24914-201ENSMUST00000157285 313 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm24961-201ENSMUST00000157918 184 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm25555-201ENSMUST00000158078 111 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm17421-201ENSMUST00000167845 674 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm17060-201ENSMUST00000172394 824 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm14527-201ENSMUST00000179300 639 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm28785-201ENSMUST00000187478 379 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm37576-201ENSMUST00000194228 372 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm43227-201ENSMUST00000202239 677 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm44050-201ENSMUST00000204263 527 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm45778-201ENSMUST00000211959 153 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 AC154252.1-201ENSMUST00000226041 473 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm24707-201ENSMUST00000082812 107 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Gm24035-201ENSMUST00000082867 107 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms