Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm28552-201ENSMUST00000190725 388 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Gm7299-201ENSMUST00000194441 581 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Gm44088-201ENSMUST00000204595 237 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Gm44927-201ENSMUST00000207573 716 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Gm45245-201ENSMUST00000210082 376 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 AC134254.4-201ENSMUST00000223086 370 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 AL645546.2-201ENSMUST00000224526 265 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Gm23736-201ENSMUST00000082553 75 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Snora7a-201ENSMUST00000082629 140 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Snora70-201ENSMUST00000083047 137 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cldn9Q9Z0S7 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm23530-201ENSMUST00000104564 137 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm14681-201ENSMUST00000118047 411 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm12591-201ENSMUST00000122407 1177 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Mir1934-201ENSMUST00000158127 83 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm25977-201ENSMUST00000158697 85 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm20542-201ENSMUST00000174582 372 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm37684-201ENSMUST00000192779 355 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm17966-201ENSMUST00000193453 594 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm18340-201ENSMUST00000196342 609 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm23925-201ENSMUST00000082471 132 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm23136-201ENSMUST00000083425 99 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Cldn9Q9Z0S7 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm25047-201ENSMUST00000122667 104 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm22059-201ENSMUST00000157544 104 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm24289-201ENSMUST00000157629 135 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm25667-201ENSMUST00000157701 275 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm25519-201ENSMUST00000158392 127 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm28390-201ENSMUST00000185212 700 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm37431-201ENSMUST00000195102 111 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm6590-201ENSMUST00000203343 687 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm8423-201ENSMUST00000211387 607 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm18585-201ENSMUST00000215197 556 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm18363-201ENSMUST00000221671 730 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm9309-201ENSMUST00000223537 546 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.17□□□□□ -1.9
Cldn9Q9Z0S7 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Cldn9Q9Z0S7 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Cldn9Q9Z0S7 Gm24273-201ENSMUST00000102332 164 ntBASIC3.16□□□□□ -1.9
Cldn9Q9Z0S7 Gm14607-201ENSMUST00000119119 491 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms