Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm16419-201ENSMUST00000221057 625 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm7119-201ENSMUST00000221345 695 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm12582-201ENSMUST00000030555 697 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm24611-201ENSMUST00000083272 107 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim3Q9R1R2 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm23431-201ENSMUST00000104006 107 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm12515-201ENSMUST00000120116 361 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm12755-201ENSMUST00000122297 282 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm24840-201ENSMUST00000122603 147 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm24905-201ENSMUST00000158129 104 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm22840-201ENSMUST00000158444 136 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm22890-201ENSMUST00000158642 144 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm8161-201ENSMUST00000168739 481 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm18397-201ENSMUST00000176704 587 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm24754-201ENSMUST00000177997 107 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm27522-201ENSMUST00000183949 230 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Mir6385-201ENSMUST00000184295 105 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm6947-201ENSMUST00000186254 78 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm7786-201ENSMUST00000210494 436 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm4036-201ENSMUST00000220842 626 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm25699-201ENSMUST00000082896 167 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm23104-201ENSMUST00000083722 104 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim3Q9R1R2 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm12495-201ENSMUST00000119750 447 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm15157-201ENSMUST00000121852 702 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm19243-201ENSMUST00000198592 269 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm2314-201ENSMUST00000200391 586 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm43198-201ENSMUST00000200927 326 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm44611-201ENSMUST00000207507 355 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm7380-201ENSMUST00000211599 466 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm45814-201ENSMUST00000212646 775 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm19233-201ENSMUST00000219772 936 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm10212-201ENSMUST00000087884 324 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms