Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm12118-201ENSMUST00000119766 532 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm11825-201ENSMUST00000120710 736 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm15428-201ENSMUST00000121352 333 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm12413-201ENSMUST00000121508 312 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm26169-201ENSMUST00000158420 135 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm23115-201ENSMUST00000158480 108 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm22435-201ENSMUST00000158552 128 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm17119-201ENSMUST00000163943 280 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm26400-201ENSMUST00000175012 85 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm22420-201ENSMUST00000178795 126 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm26701-201ENSMUST00000181571 234 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Mir7020-201ENSMUST00000183787 70 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Mir7687-201ENSMUST00000184722 59 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm5368-201ENSMUST00000189012 589 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm28883-201ENSMUST00000189256 369 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm43286-201ENSMUST00000197420 424 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm9332-201ENSMUST00000198431 730 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.81□□□□□ -1.48
Prpf40aQ9R1C7 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 n-R5s202-201ENSMUST00000104517 114 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm8217-201ENSMUST00000119136 465 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm13533-201ENSMUST00000121104 177 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm24186-201ENSMUST00000157983 127 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm23262-201ENSMUST00000158323 168 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm24818-201ENSMUST00000175093 161 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Mir7008-201ENSMUST00000184398 63 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Mir7674-201ENSMUST00000184964 63 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm8296-201ENSMUST00000185597 524 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm19206-201ENSMUST00000186401 827 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm8939-201ENSMUST00000192577 964 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm38053-201ENSMUST00000193938 160 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 AC130222.1-201ENSMUST00000221198 256 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm46389-201ENSMUST00000223199 392 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Prpf40aQ9R1C7 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm37387-201ENSMUST00000192201 1806 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm11481-201ENSMUST00000120069 255 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm14008-201ENSMUST00000120483 274 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm25861-201ENSMUST00000158251 109 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm24876-201ENSMUST00000158780 92 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm9022-202ENSMUST00000183285 483 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Mir7653-201ENSMUST00000184358 61 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms