Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trem1Q9JKE2 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm14517-201ENSMUST00000119040 337 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm12466-201ENSMUST00000121199 620 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm25177-201ENSMUST00000122634 117 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm23513-201ENSMUST00000158181 133 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm6625-201ENSMUST00000177870 272 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Mir6410-201ENSMUST00000184204 104 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm29740-201ENSMUST00000193182 655 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm30341-201ENSMUST00000194363 289 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm37417-201ENSMUST00000195257 454 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Rnu3a-202ENSMUST00000196710 213 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm42465-201ENSMUST00000197036 492 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm43116-201ENSMUST00000199789 195 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm45023-201ENSMUST00000207951 379 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm18645-201ENSMUST00000209593 651 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm18585-201ENSMUST00000215197 556 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Gm46327-201ENSMUST00000218240 365 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Rnu3a-201ENSMUST00000083936 214 ntBASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Trem1Q9JKE2 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm15313-201ENSMUST00000119179 282 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm13973-201ENSMUST00000121371 894 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm13007-201ENSMUST00000121866 365 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm24059-201ENSMUST00000157493 312 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm24720-201ENSMUST00000157518 166 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 S100a11-ps-201ENSMUST00000181735 306 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm18486-201ENSMUST00000184040 298 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm29299-201ENSMUST00000185609 923 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms