Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm19503-201ENSMUST00000187109 241 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm20811-201ENSMUST00000190500 553 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm43730-201ENSMUST00000199863 372 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm43975-201ENSMUST00000203023 481 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm43892-201ENSMUST00000204373 265 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm45553-201ENSMUST00000209929 507 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim54Q9ERP3 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.33□□□□□ -1.72
Trim54Q9ERP3 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm26384-201ENSMUST00000102183 110 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm12225-201ENSMUST00000117995 298 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm11645-201ENSMUST00000121589 649 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm14559-201ENSMUST00000121745 496 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm17030-201ENSMUST00000167016 393 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm25817-201ENSMUST00000177758 121 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm24766-201ENSMUST00000179182 121 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm5527-201ENSMUST00000179821 642 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm29641-201ENSMUST00000188955 259 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm18635-201ENSMUST00000199020 1060 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm17838-201ENSMUST00000205872 876 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm29754-201ENSMUST00000206269 358 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm23939-201ENSMUST00000082880 133 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Mir323-201ENSMUST00000083683 86 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim54Q9ERP3 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.32□□□□□ -1.72
Trim54Q9ERP3 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 AC134917.1-201ENSMUST00000220517 1449 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm24544-201ENSMUST00000103862 110 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm29073-201ENSMUST00000185563 664 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm29165-201ENSMUST00000190655 664 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm29211-201ENSMUST00000191470 664 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm37828-201ENSMUST00000192496 432 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm37111-201ENSMUST00000193250 634 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm42828-201ENSMUST00000199669 469 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm45379-201ENSMUST00000211772 549 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 AC145736.1-201ENSMUST00000214661 479 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms