Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm45574-201ENSMUST00000210921 331 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Lima1Q9ERG0 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm25272-201ENSMUST00000104293 128 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm14537-201ENSMUST00000117464 599 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm9119-201ENSMUST00000118866 495 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm25295-201ENSMUST00000122794 306 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Lima1Q9ERG0 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm26100-201ENSMUST00000157245 127 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm22380-201ENSMUST00000157479 95 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm25525-201ENSMUST00000177701 107 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm26178-201ENSMUST00000177706 107 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm26465-201ENSMUST00000178517 107 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm24317-201ENSMUST00000178536 107 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm25021-201ENSMUST00000179184 107 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm22995-201ENSMUST00000179670 107 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm24424-201ENSMUST00000179714 107 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm24389-201ENSMUST00000179962 107 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm25672-201ENSMUST00000180111 107 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm29163-201ENSMUST00000188029 107 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm33973-201ENSMUST00000195148 534 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm45701-201ENSMUST00000212049 235 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm24147-201ENSMUST00000082763 144 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm25699-201ENSMUST00000082896 167 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm23815-201ENSMUST00000083231 107 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Gm23520-201ENSMUST00000093736 107 ntBASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Lima1Q9ERG0 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.06□□□□□ -1.92
Lima1Q9ERG0 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm22722-201ENSMUST00000157467 132 ntBASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm22833-201ENSMUST00000158292 132 ntBASIC3.06□□□□□ -1.92
Lima1Q9ERG0 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.06□□□□□ -1.92
Lima1Q9ERG0 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm5983-201ENSMUST00000197739 770 ntBASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.06□□□□□ -1.92
Lima1Q9ERG0 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.06□□□□□ -1.92
Lima1Q9ERG0 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm23925-201ENSMUST00000082471 132 ntBASIC3.06□□□□□ -1.92
Lima1Q9ERG0 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Gm23942-201ENSMUST00000101956 107 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Gm14622-201ENSMUST00000117117 468 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Gm26477-201ENSMUST00000122617 323 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Gm38329-201ENSMUST00000193473 427 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Gm44076-201ENSMUST00000203072 520 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Gm18193-201ENSMUST00000210017 772 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Lima1Q9ERG0 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 131.2 ms