Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Gm6615-201ENSMUST00000199426 631 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Gm43478-201ENSMUST00000200381 292 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.54□□□□□ -2
Hmgn3Q9DCB1 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hmgn3Q9DCB1 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.54□□□□□ -2
Hmgn3Q9DCB1 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm18594-201ENSMUST00000175733 1403 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28634-201ENSMUST00000191087 2613 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm14162-201ENSMUST00000121985 601 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm7209-201ENSMUST00000122339 333 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm24553-201ENSMUST00000158653 131 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm24681-201ENSMUST00000158760 107 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm43521-201ENSMUST00000197838 255 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm43107-201ENSMUST00000198729 255 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm8106-201ENSMUST00000213123 523 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 AC141884.1-201ENSMUST00000226327 636 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Diaph3-206ENSMUST00000226745 713 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.53□□□□□ -2
Hmgn3Q9DCB1 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.53□□□□□ -2.01
Hmgn3Q9DCB1 Gm8734-201ENSMUST00000211669 1312 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm25466-201ENSMUST00000103995 132 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm11890-201ENSMUST00000119585 417 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm13210-201ENSMUST00000121483 273 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm15065-201ENSMUST00000121699 273 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm23980-201ENSMUST00000157135 158 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm6501-201ENSMUST00000187178 916 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm29045-201ENSMUST00000187278 698 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm29576-201ENSMUST00000188020 678 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm28354-201ENSMUST00000190904 678 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm32340-201ENSMUST00000192883 259 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm18384-201ENSMUST00000195974 808 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm43405-201ENSMUST00000198642 337 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm43084-201ENSMUST00000200696 947 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm44118-201ENSMUST00000204665 229 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Gm7948-201ENSMUST00000212607 844 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.52□□□□□ -2.01
Hmgn3Q9DCB1 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC2.51□□□□□ -2.01
Hmgn3Q9DCB1 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.51□□□□□ -2.01
Hmgn3Q9DCB1 Gm6893-201ENSMUST00000118385 522 ntBASIC2.51□□□□□ -2.01
Hmgn3Q9DCB1 Gm25945-201ENSMUST00000122484 135 ntBASIC2.51□□□□□ -2.01
Hmgn3Q9DCB1 Gm25292-201ENSMUST00000122797 322 ntBASIC2.51□□□□□ -2.01
Hmgn3Q9DCB1 Gm14389-201ENSMUST00000140453 241 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms