Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC172027.1-201ENSMUST00000217659 337 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm5176-202ENSMUST00000220267 583 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm16419-201ENSMUST00000221057 625 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Cdc40Q9DC48 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm6429-201ENSMUST00000117144 475 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm11797-201ENSMUST00000121336 754 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm15147-201ENSMUST00000122263 483 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm15946-201ENSMUST00000160654 423 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm5527-201ENSMUST00000179821 642 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm28030-201ENSMUST00000184987 138 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm29365-201ENSMUST00000189461 699 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm18921-201ENSMUST00000221798 366 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Mir101b-201ENSMUST00000083622 97 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm10242-201ENSMUST00000090064 330 ntBASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Cdc40Q9DC48 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm26145-201ENSMUST00000104476 127 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Mir7578-201ENSMUST00000183455 82 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm28148-201ENSMUST00000186924 697 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm44513-201ENSMUST00000206811 439 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 AC158388.1-201ENSMUST00000225441 256 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm9765-201ENSMUST00000043170 321 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.17□□□□□ -1.9
Cdc40Q9DC48 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm24376-201ENSMUST00000104399 127 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm14622-201ENSMUST00000117117 468 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm12739-201ENSMUST00000119769 382 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm15157-201ENSMUST00000121852 702 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Cdc40Q9DC48 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms