Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc39Q9D5Y1 Gm37999-201ENSMUST00000195178 1809 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm12805-201ENSMUST00000117305 1048 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm13167-201ENSMUST00000118554 578 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm13873-201ENSMUST00000119208 427 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 n-R5s179-201ENSMUST00000122564 118 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm24289-201ENSMUST00000157629 135 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm6264-202ENSMUST00000162896 1217 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm26915-201ENSMUST00000183080 748 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Mir6413-201ENSMUST00000184049 108 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm37708-201ENSMUST00000192337 895 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm7443-201ENSMUST00000206355 378 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm44513-201ENSMUST00000206811 439 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm44857-201ENSMUST00000208331 196 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm18039-201ENSMUST00000217816 728 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm23975-201ENSMUST00000082685 106 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm23460-201ENSMUST00000083258 109 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Mir193a-201ENSMUST00000083461 66 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm37868-201ENSMUST00000195578 2735 ntBASIC4□□□□□ -1.77
Ccdc39Q9D5Y1 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Gm13122-201ENSMUST00000118380 453 ntBASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Gm11876-201ENSMUST00000120002 269 ntBASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Gm15157-201ENSMUST00000121852 702 ntBASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Gm26020-201ENSMUST00000122729 183 ntBASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Gm37290-201ENSMUST00000195775 339 ntBASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Gm43415-201ENSMUST00000201934 750 ntBASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Gm18645-202ENSMUST00000212222 760 ntBASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Gm35405-201ENSMUST00000218754 400 ntBASIC3.99□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Gm15382-201ENSMUST00000118011 537 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Gm13059-201ENSMUST00000119881 398 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Gm24592-201ENSMUST00000122505 106 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Gm25967-201ENSMUST00000157168 147 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Gm28926-201ENSMUST00000191063 680 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Gm6140-201ENSMUST00000192494 966 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Gm6510-201ENSMUST00000195916 574 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Gm44016-201ENSMUST00000203463 164 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Gm35876-201ENSMUST00000205044 459 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.98□□□□□ -1.77
Ccdc39Q9D5Y1 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc39Q9D5Y1 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc39Q9D5Y1 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc39Q9D5Y1 Gm12902-201ENSMUST00000118389 322 ntBASIC3.97□□□□□ -1.77
Ccdc39Q9D5Y1 Gm6762-201ENSMUST00000121769 289 ntBASIC3.97□□□□□ -1.77
Ccdc39Q9D5Y1 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.97□□□□□ -1.77
Ccdc39Q9D5Y1 Gm23792-201ENSMUST00000122557 93 ntBASIC3.97□□□□□ -1.77
Ccdc39Q9D5Y1 Gm16331-201ENSMUST00000144274 498 ntBASIC3.97□□□□□ -1.77
Ccdc39Q9D5Y1 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.97□□□□□ -1.77
Ccdc39Q9D5Y1 Gm23671-201ENSMUST00000157472 103 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms