Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Vps28Q9D1C8 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm23271-201ENSMUST00000104052 124 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm14901-201ENSMUST00000119001 283 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm14875-201ENSMUST00000120881 319 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm11403-201ENSMUST00000122195 369 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm24666-201ENSMUST00000158937 167 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm13147-202ENSMUST00000177526 1173 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm7909-201ENSMUST00000182688 614 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm37213-201ENSMUST00000193077 586 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm44727-201ENSMUST00000204225 451 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm45539-201ENSMUST00000210313 428 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm18252-203ENSMUST00000215855 757 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 AC167977.1-201ENSMUST00000221384 234 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 AC125464.1-201ENSMUST00000228013 512 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Gm24707-201ENSMUST00000082812 107 ntBASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Vps28Q9D1C8 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm38090-201ENSMUST00000195733 1942 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm11393-201ENSMUST00000118019 288 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm14794-201ENSMUST00000118181 192 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm8757-201ENSMUST00000119660 372 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm12739-201ENSMUST00000119769 382 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm11645-201ENSMUST00000121589 649 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm24198-201ENSMUST00000157812 108 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm24961-201ENSMUST00000157918 184 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm16290-201ENSMUST00000161175 474 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm18358-201ENSMUST00000173179 1277 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm6900-201ENSMUST00000178971 342 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm2617-201ENSMUST00000185690 1066 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm36974-201ENSMUST00000194200 1071 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm37576-201ENSMUST00000194228 372 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 AC145736.1-201ENSMUST00000214661 479 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm32300-201ENSMUST00000221735 515 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 n-R5s79-201ENSMUST00000083071 120 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm25481-201ENSMUST00000083221 158 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Vps28Q9D1C8 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4□□□□□ -1.77
Vps28Q9D1C8 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4□□□□□ -1.77
Vps28Q9D1C8 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Vps28Q9D1C8 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
Vps28Q9D1C8 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Vps28Q9D1C8 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Vps28Q9D1C8 Gm23691-201ENSMUST00000101878 107 ntBASIC4□□□□□ -1.77
Vps28Q9D1C8 Mir92b-201ENSMUST00000102300 83 ntBASIC4□□□□□ -1.77
Vps28Q9D1C8 Gm11566-201ENSMUST00000118550 203 ntBASIC4□□□□□ -1.77
Vps28Q9D1C8 Gm12137-201ENSMUST00000119565 346 ntBASIC4□□□□□ -1.77
Vps28Q9D1C8 Gm9440-201ENSMUST00000119667 539 ntBASIC4□□□□□ -1.77
Vps28Q9D1C8 Gm11718-201ENSMUST00000119942 537 ntBASIC4□□□□□ -1.77
Vps28Q9D1C8 Gm14008-201ENSMUST00000120483 274 ntBASIC4□□□□□ -1.77
Vps28Q9D1C8 Gm11692-201ENSMUST00000122121 902 ntBASIC4□□□□□ -1.77
Vps28Q9D1C8 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Vps28Q9D1C8 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4□□□□□ -1.77
Vps28Q9D1C8 Gm26148-201ENSMUST00000157430 68 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms