Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm14651-201ENSMUST00000147192 442 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm25386-201ENSMUST00000157814 288 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Mir3104-201ENSMUST00000174911 63 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Mir5134-201ENSMUST00000175529 78 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Mir6996-201ENSMUST00000183922 61 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm28304-201ENSMUST00000185977 312 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm29256-201ENSMUST00000189094 312 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm28484-201ENSMUST00000190606 312 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm43975-201ENSMUST00000203023 481 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm17780-201ENSMUST00000207142 612 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm44887-201ENSMUST00000208980 178 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm20039-201ENSMUST00000210329 394 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.67□□□□□ -1.82
Ddx28Q9CWT6 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm14172-201ENSMUST00000118255 644 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm2318-201ENSMUST00000119623 639 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm12748-201ENSMUST00000120763 504 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm2768-201ENSMUST00000121062 250 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm11506-201ENSMUST00000122414 470 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm16250-201ENSMUST00000148974 256 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm8224-201ENSMUST00000166178 497 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm6486-201ENSMUST00000166202 434 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm7346-201ENSMUST00000169661 476 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm7438-201ENSMUST00000177664 639 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm7408-201ENSMUST00000178014 639 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm7386-201ENSMUST00000178020 639 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm3657-201ENSMUST00000178170 639 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm7415-201ENSMUST00000178205 639 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm7398-201ENSMUST00000178589 639 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm7391-201ENSMUST00000178680 639 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm7375-201ENSMUST00000179232 639 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm3681-201ENSMUST00000179940 639 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm37979-201ENSMUST00000193065 712 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm4644-201ENSMUST00000197587 400 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm42758-201ENSMUST00000202146 283 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm44254-201ENSMUST00000204184 322 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm18944-201ENSMUST00000207672 643 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm5338-201ENSMUST00000209530 639 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm18921-201ENSMUST00000221798 366 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm18388-201ENSMUST00000222339 557 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm10242-201ENSMUST00000090064 330 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.66□□□□□ -1.82
Ddx28Q9CWT6 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Ddx28Q9CWT6 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.65□□□□□ -1.82
Ddx28Q9CWT6 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms