Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm21638-201ENSMUST00000179473 836 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Gm24520-201ENSMUST00000179510 110 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Gm43704-201ENSMUST00000196164 496 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Gm18645-202ENSMUST00000212222 760 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 AC167202.1-201ENSMUST00000219027 331 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Smc1aQ9CU62 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Gm22245-201ENSMUST00000082479 103 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Gm25205-201ENSMUST00000082841 103 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Gm22739-201ENSMUST00000083437 160 ntBASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Smc1aQ9CU62 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Smc1aQ9CU62 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm24376-201ENSMUST00000104399 127 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm14975-201ENSMUST00000118741 664 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm15195-201ENSMUST00000118775 263 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm15147-201ENSMUST00000122263 483 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm16363-201ENSMUST00000132460 877 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm2892-201ENSMUST00000145537 711 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm37828-201ENSMUST00000192496 432 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm6590-201ENSMUST00000203343 687 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.98□□□□□ -1.77
Smc1aQ9CU62 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm24831-201ENSMUST00000116778 126 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm12739-201ENSMUST00000119769 382 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm23257-201ENSMUST00000158322 132 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm6947-201ENSMUST00000186254 78 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm32381-201ENSMUST00000203192 476 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm44404-201ENSMUST00000203979 636 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm19244-201ENSMUST00000204340 253 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm7443-201ENSMUST00000206355 378 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm25699-201ENSMUST00000082896 167 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm25480-201ENSMUST00000083217 133 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Smc1aQ9CU62 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.96□□□□□ -1.77
Smc1aQ9CU62 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.96□□□□□ -1.77
Smc1aQ9CU62 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Smc1aQ9CU62 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Gm23431-201ENSMUST00000104006 107 ntBASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Gm25835-201ENSMUST00000158917 144 ntBASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Gm43897-201ENSMUST00000204019 309 ntBASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Gm19253-201ENSMUST00000204279 307 ntBASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Gm45080-201ENSMUST00000206648 283 ntBASIC3.96□□□□□ -1.78
Smc1aQ9CU62 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Gm18903-201ENSMUST00000215343 480 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms