Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm21572-201ENSMUST00000180134 498 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 Gm21529-201ENSMUST00000180175 498 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 Mir7658-201ENSMUST00000184043 57 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 Gm29370-202ENSMUST00000187476 499 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 Gm44092-201ENSMUST00000204470 258 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 Gm7726-201ENSMUST00000206241 231 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 Gm44964-201ENSMUST00000207011 273 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 Gm44594-201ENSMUST00000208982 407 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 Gm16419-201ENSMUST00000221057 625 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 CT030254.3-201ENSMUST00000225959 1231 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 Gm26064-201ENSMUST00000083381 109 ntBASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Rpa3Q9CQ71 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Gm13803-201ENSMUST00000117547 489 ntBASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Gm23865-201ENSMUST00000157723 97 ntBASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Gm20651-201ENSMUST00000177219 329 ntBASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Gm7588-201ENSMUST00000216866 571 ntBASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Gm25005-201ENSMUST00000083812 156 ntBASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Rpa3Q9CQ71 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm7853-201ENSMUST00000100708 478 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm24273-201ENSMUST00000102332 164 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm24403-201ENSMUST00000104616 130 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm14971-201ENSMUST00000117980 663 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm13717-201ENSMUST00000119868 365 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm14162-201ENSMUST00000121985 601 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm25971-201ENSMUST00000158953 286 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm25203-202ENSMUST00000200458 216 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm4528-201ENSMUST00000207905 551 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm7204-201ENSMUST00000062591 600 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm25203-201ENSMUST00000082842 215 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 AF357428-201ENSMUST00000083815 69 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Rpa3Q9CQ71 Gm6079-201ENSMUST00000121356 404 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Gm14389-201ENSMUST00000140453 241 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Gm26371-201ENSMUST00000157829 104 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Gm29105-201ENSMUST00000187256 450 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Gm28155-201ENSMUST00000191066 151 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Gm19418-201ENSMUST00000197436 580 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.18□□□□□ -1.9
Rpa3Q9CQ71 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm14845-201ENSMUST00000121259 306 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm8840-201ENSMUST00000122454 386 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms