Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm37098-201ENSMUST00000192290 244 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm37817-201ENSMUST00000195276 434 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm44611-201ENSMUST00000207507 355 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm45316-201ENSMUST00000210128 162 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm9712-201ENSMUST00000210842 311 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm4036-201ENSMUST00000220842 626 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm8231-201ENSMUST00000221617 783 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 LOC667541-201ENSMUST00000223408 278 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.18□□□□□ -1.9
Use1Q9CQ56 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm13379-201ENSMUST00000118053 621 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm15195-201ENSMUST00000118775 263 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm15026-201ENSMUST00000119219 458 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm10075-201ENSMUST00000162030 545 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm22693-201ENSMUST00000175049 442 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Mir6963-201ENSMUST00000183535 71 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm37164-201ENSMUST00000192809 637 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm19243-201ENSMUST00000198592 269 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm44727-201ENSMUST00000204225 451 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm46234-201ENSMUST00000218702 259 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Use1Q9CQ56 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Use1Q9CQ56 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.17□□□□□ -1.9
Use1Q9CQ56 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Use1Q9CQ56 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Use1Q9CQ56 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Use1Q9CQ56 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 Mir193b-201ENSMUST00000103784 79 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm24987-201ENSMUST00000104453 134 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm14880-201ENSMUST00000117581 292 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm12803-201ENSMUST00000118907 821 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm23755-201ENSMUST00000157578 343 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm23084-201ENSMUST00000157850 114 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm26487-201ENSMUST00000158022 94 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm44355-201ENSMUST00000200417 104 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm43227-201ENSMUST00000202239 677 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm18855-201ENSMUST00000206689 570 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm18015-201ENSMUST00000214879 316 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Use1Q9CQ56 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Use1Q9CQ56 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Use1Q9CQ56 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.16□□□□□ -1.9
Use1Q9CQ56 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Use1Q9CQ56 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.16□□□□□ -1.9
Use1Q9CQ56 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Use1Q9CQ56 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Use1Q9CQ56 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Use1Q9CQ56 Mir690-201ENSMUST00000102110 109 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm25560-201ENSMUST00000104606 176 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm11253-201ENSMUST00000118486 201 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm12335-201ENSMUST00000119738 327 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms