Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
H1fooQ8VIK3 Gm43888-201ENSMUST00000204405 2587 ntBASIC3.9□□□□□ -1.78
H1fooQ8VIK3 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
H1fooQ8VIK3 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm13803-201ENSMUST00000117547 489 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm7219-201ENSMUST00000119619 297 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm6565-201ENSMUST00000121217 438 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm26347-201ENSMUST00000157526 131 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm24784-201ENSMUST00000157640 62 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm24439-201ENSMUST00000157894 117 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm23583-201ENSMUST00000158533 289 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm17119-201ENSMUST00000163943 280 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Mir3058-201ENSMUST00000175126 91 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm26335-201ENSMUST00000178449 107 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm21726-201ENSMUST00000179654 392 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm29484-201ENSMUST00000186067 324 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm28098-201ENSMUST00000191361 699 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm29740-201ENSMUST00000193182 655 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm38329-201ENSMUST00000193473 427 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm18325-201ENSMUST00000203228 835 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm44016-201ENSMUST00000203463 164 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm2522-201ENSMUST00000204280 322 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm19126-201ENSMUST00000207896 509 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Snord15b-201ENSMUST00000083032 145 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm6361-201ENSMUST00000091031 435 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Ankrd28-204ENSMUST00000227089 3522 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm43668-201ENSMUST00000197014 5342 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm5117-201ENSMUST00000178878 2553 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 AC133076.2-201ENSMUST00000227678 3532 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Gm36298-201ENSMUST00000223394 1732 ntBASIC3.9□□□□□ -1.79
H1fooQ8VIK3 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm2123-201ENSMUST00000221476 2836 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm12982-201ENSMUST00000117408 190 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm11346-201ENSMUST00000118346 704 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm14516-201ENSMUST00000120012 252 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm14530-201ENSMUST00000122391 333 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm26098-201ENSMUST00000157247 288 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm28163-201ENSMUST00000187099 325 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm29668-201ENSMUST00000187802 315 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm6651-201ENSMUST00000189471 271 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Vmn1r82-202ENSMUST00000191002 918 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm38046-201ENSMUST00000192733 550 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Trbv8-201ENSMUST00000194020 285 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm43710-201ENSMUST00000199583 452 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm34091-201ENSMUST00000200875 604 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm43578-201ENSMUST00000201250 459 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm44523-201ENSMUST00000205616 417 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm45105-201ENSMUST00000207824 397 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm7624-201ENSMUST00000209702 435 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Gm18320-201ENSMUST00000211304 595 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 AC159252.1-201ENSMUST00000224450 553 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.89□□□□□ -1.79
H1fooQ8VIK3 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 177 ms