Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm25726-201ENSMUST00000104529 129 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm22195-201ENSMUST00000116861 108 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm15553-201ENSMUST00000118757 430 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm12935-201ENSMUST00000119352 246 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm14605-201ENSMUST00000120599 268 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm13339-201ENSMUST00000120651 510 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm12770-201ENSMUST00000121734 462 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm22208-201ENSMUST00000122658 110 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm23352-201ENSMUST00000158428 64 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm22307-201ENSMUST00000180019 107 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm23379-201ENSMUST00000180026 107 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Mir6391-201ENSMUST00000184391 104 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm27611-201ENSMUST00000184690 108 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm28267-201ENSMUST00000191093 265 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm38146-201ENSMUST00000194121 1293 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm42465-201ENSMUST00000197036 492 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm45209-201ENSMUST00000207122 353 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm22293-201ENSMUST00000083314 109 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm23099-201ENSMUST00000083454 139 ntBASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trerf1Q8BXJ2 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Trerf1Q8BXJ2 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Trerf1Q8BXJ2 Gm38699-201ENSMUST00000221301 1740 ntBASIC4.46□□□□□ -1.69
Trerf1Q8BXJ2 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Trerf1Q8BXJ2 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Trerf1Q8BXJ2 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm23691-201ENSMUST00000101878 107 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm11854-201ENSMUST00000117839 446 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm15113-201ENSMUST00000119280 836 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Defa-ps13-201ENSMUST00000120695 204 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm12340-201ENSMUST00000121617 462 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm26001-201ENSMUST00000157989 103 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm22733-201ENSMUST00000158094 91 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm18522-201ENSMUST00000173947 650 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm26460-201ENSMUST00000175061 126 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm23152-201ENSMUST00000175322 116 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm5527-201ENSMUST00000179821 642 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm26652-202ENSMUST00000181672 475 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm29228-201ENSMUST00000185489 418 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm37050-201ENSMUST00000193464 466 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm34015-201ENSMUST00000194908 451 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Mir5121-201ENSMUST00000198528 74 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gm5876-201ENSMUST00000203735 243 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Trerf1Q8BXJ2 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 163.5 ms