Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm26365-201ENSMUST00000179177 94 ntBASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Gm27743-201ENSMUST00000185136 126 ntBASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Gm8681-201ENSMUST00000219115 618 ntBASIC3.6□□□□□ -1.83
Nup54Q8BTS4 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.6□□□□□ -1.83
Nup54Q8BTS4 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Gm10242-201ENSMUST00000090064 330 ntBASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.6□□□□□ -1.83
Nup54Q8BTS4 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Nup54Q8BTS4 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm24544-201ENSMUST00000103862 110 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm25764-201ENSMUST00000104092 134 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm14811-201ENSMUST00000117070 117 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm12458-201ENSMUST00000119387 495 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm13059-201ENSMUST00000119881 398 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm13194-201ENSMUST00000142299 311 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm25438-201ENSMUST00000158281 110 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm27445-201ENSMUST00000184484 72 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm27538-201ENSMUST00000185065 294 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm6947-201ENSMUST00000186254 78 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm38281-201ENSMUST00000192301 315 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm2189-201ENSMUST00000201419 429 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm43039-201ENSMUST00000202883 963 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 AC121114.1-201ENSMUST00000228522 570 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm6369-201ENSMUST00000069626 412 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm24147-201ENSMUST00000082763 144 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm25699-201ENSMUST00000082896 167 ntBASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.59□□□□□ -1.83
Nup54Q8BTS4 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.59□□□□□ -1.84
Nup54Q8BTS4 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.59□□□□□ -1.84
Nup54Q8BTS4 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Nup54Q8BTS4 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.59□□□□□ -1.84
Nup54Q8BTS4 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm25412-201ENSMUST00000180258 107 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Mir6715-201ENSMUST00000184990 57 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm29013-201ENSMUST00000187431 237 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm28155-201ENSMUST00000191066 151 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm38213-201ENSMUST00000193203 173 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm44349-201ENSMUST00000197048 123 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm44395-201ENSMUST00000197056 153 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm45080-201ENSMUST00000206648 283 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Gm21007-201ENSMUST00000221024 326 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nup54Q8BTS4 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms