Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Snord92-201ENSMUST00000175548 85 ntBASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm22776-201ENSMUST00000178634 94 ntBASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm23767-201ENSMUST00000179278 94 ntBASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm28146-201ENSMUST00000185517 701 ntBASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm19774-201ENSMUST00000190667 114 ntBASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm43115-201ENSMUST00000196244 160 ntBASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm30738-201ENSMUST00000221346 502 ntBASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.74□□□□□ -1.81
Ccdc40Q8BI79 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm11869-201ENSMUST00000118701 329 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm11429-201ENSMUST00000119089 144 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm11830-201ENSMUST00000120175 561 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm22986-201ENSMUST00000122753 130 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm23816-201ENSMUST00000179617 132 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm27189-201ENSMUST00000184119 190 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Mir6899-201ENSMUST00000184798 64 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm36934-201ENSMUST00000192007 306 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Trbv8-201ENSMUST00000194020 285 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm43096-201ENSMUST00000196173 421 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Mir129b-201ENSMUST00000197461 65 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm43407-201ENSMUST00000199816 317 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm44137-201ENSMUST00000203670 367 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm43967-201ENSMUST00000203787 301 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm43954-201ENSMUST00000204634 544 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Gm23850-201ENSMUST00000083830 169 ntBASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc40Q8BI79 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm26418-201ENSMUST00000104275 137 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm14570-201ENSMUST00000119444 391 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm15193-201ENSMUST00000120224 865 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm22480-201ENSMUST00000122568 128 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm15274-201ENSMUST00000131442 291 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21979-201ENSMUST00000139887 291 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm15259-201ENSMUST00000151262 291 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm23257-201ENSMUST00000158322 132 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm29299-201ENSMUST00000185609 923 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm29408-201ENSMUST00000187536 216 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms