Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm14766-201ENSMUST00000121689 367 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm14411-201ENSMUST00000121798 914 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm8200-201ENSMUST00000122390 222 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm13092-201ENSMUST00000136346 260 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm25365-201ENSMUST00000158852 121 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm16134-201ENSMUST00000161714 336 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Mir5134-201ENSMUST00000175529 78 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm24520-201ENSMUST00000179510 110 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm11394-201ENSMUST00000181421 517 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm28304-201ENSMUST00000185977 312 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm29256-201ENSMUST00000189094 312 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm29428-201ENSMUST00000190086 409 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm28484-201ENSMUST00000190606 312 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm5551-201ENSMUST00000199720 690 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm26206-201ENSMUST00000082908 110 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Mir346-201ENSMUST00000083547 98 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.22□□□□□ -1.73
Ubfd1Q78JW9 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm23273-201ENSMUST00000104058 135 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm24788-201ENSMUST00000104283 156 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm6923-201ENSMUST00000118343 406 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm14848-201ENSMUST00000121850 467 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm6969-201ENSMUST00000140065 342 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm4487-201ENSMUST00000150617 442 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm25058-201ENSMUST00000157365 128 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm25666-201ENSMUST00000157702 107 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm23473-201ENSMUST00000158883 116 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm29610-201ENSMUST00000187749 453 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm30280-201ENSMUST00000192214 262 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm38076-201ENSMUST00000193889 450 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm43652-201ENSMUST00000196219 675 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm20039-201ENSMUST00000210329 394 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm18703-201ENSMUST00000215318 333 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm26128-201ENSMUST00000083170 110 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.21□□□□□ -1.74
Ubfd1Q78JW9 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm25088-201ENSMUST00000101803 79 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm24951-201ENSMUST00000102182 109 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm14605-201ENSMUST00000120599 268 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm6568-201ENSMUST00000122274 697 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm11506-201ENSMUST00000122414 470 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms