Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm25116-201ENSMUST00000157191 122 ntBASIC3.29□□□□□ -1.88
Scn10aQ6QIY3 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Scn10aQ6QIY3 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Scn10aQ6QIY3 Gm8649-201ENSMUST00000181799 233 ntBASIC3.29□□□□□ -1.88
Scn10aQ6QIY3 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.29□□□□□ -1.88
Scn10aQ6QIY3 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.29□□□□□ -1.88
Scn10aQ6QIY3 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.29□□□□□ -1.88
Scn10aQ6QIY3 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.29□□□□□ -1.88
Scn10aQ6QIY3 Snord14e-201ENSMUST00000082857 90 ntBASIC3.29□□□□□ -1.88
Scn10aQ6QIY3 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Scn10aQ6QIY3 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Gm25966-201ENSMUST00000157169 117 ntBASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Gm23268-201ENSMUST00000175494 78 ntBASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Gm20718-201ENSMUST00000176058 259 ntBASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Gm37111-201ENSMUST00000193250 634 ntBASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 AC132446.1-201ENSMUST00000222655 226 ntBASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Gm26494-201ENSMUST00000083154 143 ntBASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 Gm24493-201ENSMUST00000083805 143 ntBASIC3.28□□□□□ -1.88
Scn10aQ6QIY3 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Gm12788-201ENSMUST00000119090 308 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Gm17063-201ENSMUST00000168135 456 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Gm27636-201ENSMUST00000184528 122 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Gm8392-201ENSMUST00000185647 835 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Gm28534-201ENSMUST00000187744 676 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Gm43371-201ENSMUST00000202838 1031 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 AC162376.1-201ENSMUST00000220120 435 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Gm10343-201ENSMUST00000096279 348 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 CT030030.1-201ENSMUST00000218809 152 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Defa-ps18-201ENSMUST00000098889 371 ntBASIC3.27□□□□□ -1.89
Scn10aQ6QIY3 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Gm25106-201ENSMUST00000122672 134 ntBASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Gm24443-201ENSMUST00000157242 132 ntBASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Gm6245-201ENSMUST00000164699 768 ntBASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Gm25642-201ENSMUST00000175137 66 ntBASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.26□□□□□ -1.89
Scn10aQ6QIY3 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm11221-201ENSMUST00000117230 597 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm25863-201ENSMUST00000158249 329 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm25025-201ENSMUST00000175018 111 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm29356-201ENSMUST00000186935 373 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Mir378a-201ENSMUST00000198300 66 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm43264-201ENSMUST00000202284 325 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm23766-201ENSMUST00000103894 80 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm25529-201ENSMUST00000104850 92 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm12090-201ENSMUST00000118692 758 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm25456-201ENSMUST00000157952 109 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm38008-201ENSMUST00000195333 518 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn10aQ6QIY3 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms